Trichoplusia ni (cabbage looper): 113503385
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Entry
113503385 CDS
T05757
Name
(RefSeq) probable ATP-dependent RNA helicase DHX34 isoform X1
KO
K20101
ATP-dependent RNA helicase DHX34 [EC:
5.6.2.6
]
Organism
tnl
Trichoplusia ni (cabbage looper)
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tnl03019
]
113503385
Enzymes [BR:
tnl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
113503385
Messenger RNA biogenesis [BR:
tnl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
113503385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C2H2_DHX34
Helicase_C
OB_NTP_bind
DEAD
AAA_19
HA2_N
AAA_22
Herpes_ori_bp
AAA_14
ResIII
AAA_16
Flavi_DEAD
Motif
Other DBs
NCBI-GeneID:
113503385
NCBI-ProteinID:
XP_026741114
UniProt:
A0A7E5WK97
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All DBs
Position
19:complement(730435..744594)
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AA seq
1157 aa
AA seq
DB search
MGRTPSPGRSNYYKRRRSRSRDRDRHKVRKTSPNASTSKHVEEEFSFTNYKRELNKIILY
SSESNTVANSLDDFWVFLKKYEATLKKAGKPIVDYGPEENSEESSEKFSKFHCINFTSSM
KYVDTVYDERERRKLDKNLFQAFLNIVSIYIDFKNKEKFTKLRKLRQAQRDLPVAKYRDE
IVSAVQNERVVVVAGDTGCGKSTQVPQYLHEAGFQNIACTQPRRIACVSLSKRVAYEMLT
QFESKVGYQIRFEKSKTADTKICFITEGLLLRQMSSENLPNYDVIILDEVHERHLMGDFL
LGVLKCLIHSRNDIKLVLMSATINIKLFQDYFSAESAAVIQVPGRLFPIELNYKPVLIDD
KPKRDDRLDPQPYVQIMQLIDSKYSSDERGDLLVFMSGVQEITAICDAAQQYADKTKNWI
VLPLHSGLSLAEQDKVFDYPPERVRKCIVSTNIAETSVTIDGIRFVVDSGKVKEMSYDST
TKMQRLKEFWISQASADQRKGRAGRTGPGVCYRIYSEQQYNDMEPFSTPEVSRVPLASLL
LLMSSLGVNDVRRFPFLDAPPEEAVENALLELKQHGALTSNEKLTALGRMLSQLPVEVCL
AKALVLGAGSLPPRKRDSALALAAALGVRAIYTTRAHRDFECENARKPDESDHGDPLTLL
SLYCAWLREKRDTRGGRAWSRRRGIEEQRLYELTKLAAQLRSLLQDNNLMETQEPESMSS
AERALRHGQMKQLKDMRRQYKQNAAKDAKNKKRLKVDSWEIVDEKSNEDDEVLDIRDIEF
RMTNDAQRIQALIAGSSASSGRDLIMLKVVLCRALYPQVAVADEFNHHKSAAEQLYHTWS
KPFVFLHPTSYFGKNPRVLQLTEADIQTDKPPGYDSKLPLSSKHQILCYLSLLETTKPYI
VNSMRMPAAQTLLLLAHSIDTNIGFTRIICDAWLLLEFPYAETGLNLLLKAVKLRQRWDA
LINRRLLDATPTKTVEAELEKQNLPKISYEEVQHELSCDISSYLTSDVCYTIKRLLPGDL
KTIYQGNDEAHPAIEPNPFDENFECKPHEKKGGVFVTDNVVYNCVVDTNWSYNSYEESYS
LPWTCTNCELTVCLSPIERLQHKHFICSAKEEKKILTPKTTREIKPNAKEYTCENCKQTL
YMTPVEILKHKKSCLKS
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgaaccccttctcctggtagaagtaattactacaaaagacgacggtcacgttct
cgcgatcgagaccggcataaagttaggaagacgagtccaaatgcgtctacttcaaaacat
gtcgaggaagaatttagtttcacgaattataaaagagagttgaacaaaataattttatac
agtagcgagagcaacacggttgctaatagcttagatgatttttgggtgtttttaaagaaa
tatgaagctactctaaagaaagctggcaaacctatagttgactatggacctgaagaaaat
agcgaagaatcttcagaaaagttttcaaagtttcattgcattaatttcacttcatccatg
aagtatgtggatacagtttatgatgaaagggagcgacgaaagttggacaaaaatctgttt
caagccttcttgaatattgtttccatctacattgattttaaaaataaggagaagtttact
aaacttaggaagttaagacaagctcagagagacttacctgtagctaaatatagagatgaa
attgtgtctgcagtgcagaatgaaagggtggtggtggttgctggggacacgggatgtggt
aagtccacacaagtcccacagtatctacacgaagctgggttccaaaatattgcatgtaca
caacctagaagaatagcctgtgtgtccttatctaagagagtggcatatgaaatgctgaca
caatttgaaagtaaagttggctaccagatcaggtttgaaaagagcaagacagcggacacc
aagatatgtttcatcactgaagggcttttgctgagacagatgtcatcagaaaatctaccg
aactatgacgtcataatcctagatgaggtccatgagagacatttgatgggagatttcttg
ttaggcgtgttgaagtgcctgatacacagtcgtaatgacatcaaattagttttaatgtca
gctaccattaatattaaactctttcaagattatttttcggcggagtctgctgctgttata
caggtaccaggacgtctctttcccatagaattaaattacaagccggtgttaattgacgac
aaaccgaaacgagatgacaggctcgaccctcagccttatgtacagattatgcagctgatt
gacagtaaatactcaagtgatgaaagaggcgatcttctagtattcatgtctggtgtccaa
gagatcacggctatatgtgacgcggctcaacagtacgcagacaaaactaaaaactggatt
gttttgcccttgcacagtggcctttcacttgctgaacaggataaggtgttcgactatccc
cctgaacgagtacgaaaatgtatcgtttctacaaatatagctgagacgtctgtcactatt
gatggtatacgatttgtggttgattctgggaaggtcaaagaaatgagttatgattcaaca
acaaaaatgcaacgattgaaagagttctggatctcgcaggcgagtgctgatcaaagaaaa
ggtcgtgcgggtcgaacaggccccggcgtctgctaccgcatctactctgaacaacagtac
aacgatatggaaccgtttagtactccggaagtgtcccgagtaccgctcgcatcattactg
ctactcatgagctcgttaggagtcaacgatgttaggaggttcccgtttctagacgcaccc
cctgaggaggcagtcgaaaatgctttgttggagctgaagcaacatggagccctgacctcg
aacgagaagctgaccgccctcgggcgcatgctgtcgcagctgccagtggaggtgtgcctg
gccaaggcgctggtgctgggcgcgggcagcctgccgccgcgcaagcgggactccgcgctg
gcgctggccgccgcgctaggggtcagggccatatatactacgagggcacatcgggatttt
gagtgtgagaatgcccgaaaacccgacgaatctgaccacggtgaccctttaacccttctc
tcgctatactgcgcgtggcttcgagagaaacgcgacacccgcggcggccgcgcctggtct
agaagacgcggtatcgaagaacaacgactgtacgagctcaccaaacttgctgcacaatta
cggagcttattgcaggacaacaacttaatggagactcaagaacccgagtcaatgtcgtca
gctgagcgagctttacgtcacggtcaaatgaagcaattgaaagatatgagaagacaatac
aaacaaaacgcagctaaagatgcgaaaaacaagaagcgactcaaagtagactcttgggag
atagtcgatgagaaatccaatgaagacgacgaagtactagatataagagatattgaattc
cgtatgactaacgacgctcagcgtatacaagcattgatagcgggctctagcgcttccagt
ggaagagatcttattatgttgaaggttgttttgtgcagagctttgtacccgcaagtggct
gttgctgacgaatttaatcatcacaaatctgcagccgaacaactataccacacttggagc
aagccattcgtgttcctccacccgacgtcgtacttcggcaaaaatcctcgcgtcctgcag
ctcaccgaggcagacatacagacagacaagccgccggggtacgacagcaagttgccattg
tcgagcaaacatcaaatattgtgctatctatcacttctggaaactacgaagccgtacata
gtgaactctatgcgtatgcctgccgcacaaactttgttgctgttagcgcactctatcgat
actaacataggatttacaaggataatctgtgatgcgtggctactattggagtttccttat
gctgaaactggcttgaatttactgttaaaagcggtcaaattacgacagcgatgggatgcg
ctcatcaatcgaagacttttagacgcaaccccaacaaaaacagtcgaagctgaactcgaa
aagcaaaatctaccaaaaatctcctacgaagaagtccaacatgagttgtcatgcgacata
agctcttatttgaccagcgacgtctgttacactatcaagagactactgcccggtgacctg
aagactatataccaagggaatgacgaggcccatccagcgattgaaccaaacccctttgat
gaaaactttgaatgtaaaccacatgagaagaaaggaggtgtctttgttactgataatgtt
gtttataattgcgtcgtcgacacaaactggagttacaatagctacgaagaatcctacagt
ttaccctggacgtgcacaaactgcgaacttaccgtctgcctatcacccatcgagagactc
caacacaaacacttcatatgctcagctaaagaagaaaagaaaatattaacacctaaaact
acaagggaaattaaacctaacgccaaagagtatacgtgcgaaaattgtaaacagactttg
tatatgacgcccgtagagatattgaagcataagaaaagttgtcttaaatcatag
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