KEGG   Trichoplusia ni (cabbage looper): 113503428
Entry
113503428         CDS       T05757                                 
Name
(RefSeq) RNA polymerase II elongation factor ELL isoform X1
  KO
K15183  RNA polymerase II elongation factor ELL
Organism
tnl  Trichoplusia ni (cabbage looper)
Pathway
tnl03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:tnl00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    113503428
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:tnl01009]
    113503428
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:tnl03021]
    113503428
Protein phosphatases and associated proteins [BR:tnl01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     113503428
Transcription machinery [BR:tnl03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Super elongation complex (SEC)
     113503428
    Little elongation complex (LEC)
     113503428
SSDB
Motif
Pfam: ELL Occludin_ELL DUF2076 RAP1 DUF6471 BRF1
Other DBs
NCBI-GeneID: 113503428
NCBI-ProteinID: XP_026741201
UniProt: A0A7E5WM38
LinkDB
Position
19:3541595..3587853
AA seq 665 aa
MAALPAGVQYGLSSESSYKENKELVFVKLTDSALKAIEDFLRNNRDRLAKPKIQFLPGNE
GKISIPAPASGNGPSGEATFHFSINSNAEMEGPQGSFECVRSGGARRLESCGPLPRRMRV
QANDDSYEATKDRMARTVAAEQSKCTRVIKPNQTDIGRRVKVRSAHPYSGVGATQLAERP
ERPERPERPERPERPERPERPERSERPERAERPERADRPERVERVERPAPPAPRPQPPPA
APPHAQHPQHQQHPQHPPNPHQPQRLPPNPDLTRRSLKERLIQLLALKPFKKPELYARLH
SEGIKEKERSLVNKILPHISTLKDNCYHLRRNMWNDVNEDWPFYTEEEKRMLKRRKPQNL
TPPLSSDSANSLSPRASPSASKRPSSASGLSSSSTAAATAAVAGAVAGVAGVPGVAGVVA
GAAGGEEGPAVKKQRISHYRRASPPSSGYATTSSGERQASDTEDDRTTVNKKDNGYTLNY
NTVKDLCPSPVKANGFRNSPPVEQTNITEKDITNNEPLENTELAPVPDENMTDLEEIERS
SRISRQYPPITSSNIRRAYKNEFAELYTEYRSLYARVAQVAALFTRLEHELQRAQPLSPH
HQSIEQRIVDEYRRVNNDPAYKQERRRVNYLHRKLTHIKRMVYQYDQLRNLKPERVSTAS
TTQAY
NT seq 1998 nt   +upstreamnt  +downstreamnt
atggcggccttgccagcaggtgttcagtatgggttatcatcggagtctagttataaagaa
aacaaggaactagtgtttgtgaaattaacggattcagcgctgaaagcaatcgaagacttc
cttagaaataatagggacagattggcaaaacctaaaatacagttcctacccggaaatgaa
gggaaaatctccattccggcgccagccagtggaaatggcccatcaggcgaggctacgttt
cacttcagcattaatagtaatgcagaaatggagggaccacagggttcgttcgagtgcgtc
aggagtggcggcgctcggcgtttggagtcgtgcgggccgctgccgcgtagaatgcgcgta
caggccaacgacgactcgtatgaggccacaaaggaccgtatggcgagaacagtcgccgcg
gaacagagtaaatgcacgcgcgtgattaaacctaatcagacggacatcggacgtcgcgtc
aaagtgcgttccgcgcacccctactcgggtgtgggagcaactcagctggccgagaggcct
gagaggcccgaaaggccagagaggcctgagaggcctgagaggcccgagaggcccgagcga
cctgaacggtcggaaaggccggagcgggcggagcgaccggagcgggctgaccggcccgag
cgtgtcgagagggtcgagaggcccgcaccccccgcgccgcggccgcagcccccgcccgcc
gcgccgccgcacgcgcagcacccccagcatcagcagcacccgcagcacccgcccaaccct
caccagccgcagcggctaccccctaacccggatctcactaggcggtccttgaaagaaaga
cttatacagttattagcattgaaacccttcaagaagcccgaattgtacgcgaggcttcat
agtgagggtatcaaagaaaaggagcgcagtttggtgaacaagattttgcctcatatcagt
acgctcaaggataactgttaccacttacgtagaaacatgtggaacgatgtcaacgaggac
tggcccttttatactgaggaggaaaaacgtatgctcaagaggcggaaacctcaaaaccta
actccaccgctaagcagtgactcagcaaactctctatcaccgcgagcgtcaccaagcgcc
agcaagagaccgagcagtgcgagcgggctcagctctagcagtacggcggcggcgaccgcg
gccgtagcgggggccgtagccggcgtagctggtgtgcctggcgtagctggagtagtggcg
ggtgcggcgggcggggaggagggccccgccgtcaagaagcagcgcatctcgcactaccgc
cgcgcgtccccgccctcctccggctacgcgaccacctcctcgggcgagcgacaggcctcc
gacaccgaggatgatcggaccaccgttaataaaaaggacaacggctacaccctcaattat
aatactgtaaaggatctctgccccagtcctgtgaaagcaaacggttttagaaatagtccc
ccagtagagcaaactaatatcacagaaaaagacatcacaaataatgaacccttagaaaat
acagaattagcgcctgtccctgatgagaatatgactgacttggaagagattgaaagatca
tcaaggatttcaaggcaatacccgccgatcacgagctcgaacatccggcgcgcgtacaag
aacgagttcgcggagctgtacacggagtaccggtcgctgtacgcgcgcgtggcgcaggtg
gccgcgctcttcacgcgcctcgagcacgagctgcagcgcgcgcagccgctgtcgccgcac
caccagagtatagaacaacgcatcgtggatgaatatcgacgcgtgaacaacgatcctgcg
tacaaacaggagaggcggcgcgtcaactacctgcatcgtaaactcactcacatcaagcgt
atggtttatcagtatgatcaacttcgaaacttgaaaccggaacgagtttctaccgcgagc
acaacgcaagcgtactga

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