Trichoplusia ni (cabbage looper): 113504067
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Entry
113504067 CDS
T05757
Name
(RefSeq) RNA-binding protein 8A
KO
K12876
RNA-binding protein 8A
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl03013
Nucleocytoplasmic transport
tnl03015
mRNA surveillance pathway
tnl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113504067
09122 Translation
03013 Nucleocytoplasmic transport
113504067
03015 mRNA surveillance pathway
113504067
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tnl03019
]
113504067
03041 Spliceosome [BR:
tnl03041
]
113504067
Messenger RNA biogenesis [BR:
tnl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
113504067
Spliceosome [BR:
tnl03041
]
Complex C
Other components
EJC/TREX
113504067
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_3
RRM_5
Motif
Other DBs
NCBI-GeneID:
113504067
NCBI-ProteinID:
XP_026741960
UniProt:
A0A7E5WMH6
LinkDB
All DBs
Position
21:complement(498499..501585)
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AA seq
166 aa
AA seq
DB search
MADVLDIENSEEFEVDEDGEQGIARLKEKARKRKGRGFGGEAGGGGATERGNRGRYDSLA
PEGDGNTPGPQRSVEGWILFVSNVHEEAQEEDIQNQFSEFGEIKNIHLNLDRRTGFLKGY
ALVEYETYKQAASAREALDGADILGQAISVDWCFVKGPTKGHKKRR
NT seq
501 nt
NT seq
+upstream
nt +downstream
nt
atggcagacgtgttagacatcgaaaattcagaggaatttgaagtagacgaggatggtgaa
cagggaatcgctcgtttgaaggagaaggcgcgaaaacgtaaaggaagaggttttggcggc
gaagccggtggcggaggcgctactgagagaggcaacaggggcagatacgacagcctagcg
ccagaaggtgatggcaacactcctggtcctcagaggtccgtggagggctggatattgttt
gtcagtaatgtgcatgaggaggcacaggaagaggatatacagaaccagttctcagagttt
ggtgagattaagaacatccatttgaacctggaccggcgcaccggcttcctcaagggatac
gcgctcgtcgaatacgagacgtacaagcaggctgctagcgcgcgcgaagctttagacggc
gcggacattctcgggcaagcgatatccgtcgactggtgcttcgtcaaaggtcccactaag
gggcacaagaagaggcgatag
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