Trichoplusia ni (cabbage looper): 113504292
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Entry
113504292 CDS
T05757
Name
(RefSeq) transcription initiation factor TFIID subunit 4 isoform X1
KO
K03129
transcription initiation factor TFIID subunit 4
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
113504292
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tnl03021
]
113504292
03036 Chromosome and associated proteins [BR:
tnl03036
]
113504292
Transcription machinery [BR:
tnl03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
113504292
Coactivators
SAGA/TFTC/STAGA complex
113504292
Chromosome and associated proteins [BR:
tnl03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
TFTC complex
113504292
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TAF4
TAFH
TAF
Phage_T7_Gp5_9
DUF4735
Motif
Other DBs
NCBI-GeneID:
113504292
NCBI-ProteinID:
XP_026742339
UniProt:
A0A7E5WNR5
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All DBs
Position
21:3217139..3228485
Genome browser
AA seq
896 aa
AA seq
DB search
MASAEFLEQALSTNVDENAVNAIVGSLENQLVTSVPSASSHNNIVNVFPAQNCNITSNAG
TLISGQKFITDQINSGGIVNSIQSNIVSNSNSSAPFNNVQASSPSTFTSLSLTGGVPISN
ETLKVIYTQAHHLANHHNGVTLPVQSLANGCIAQPSQSQLLHAVPASSVLPQQGNKTIAM
QPPLVIKQGTNTGQVGMQPGMVTVPMTVNSSMPASIPNVMTLNKPGGQNVVVTTQNLGSA
QPTIIPNVQILNMRPGAPAVAAQKSVATVSPRVVIGTPQVVGTRATAPITLQTLQSLQPG
QQGHLLLKTENGQYQLLRVGPAPATSTLSAPQPQTIRLSTVPAHPGVATVSTSVAAPGPM
AGQMPAASVAAPVVASVPSVVPTTPTVQAPNATTHIKPSDNTKEKCRNFLANLLDLSSKE
PPSVERNVRNLIQELIDAQVEPEEFCDRLERLLNASPQPCLIGFLKKSLPLLRQSLVTKE
LVIEGINPPAPHVAFSTIPAPAPAQPVAATSNVQMREDSSSPTLTPLLPPVLPLTLASTP
APSTMSINVAPATPSSPVQKPAQKGGSTIAVLQNIPLHTKINVNKVSSGKAMTVNSKANF
PRSTTPAGLNAVLAPGKSLLKEKEKKSSGQFSQPFGDDKMAGDDDINDVAAMGGVNLAEE
SQRILGSTEMIGTQIRSCKEEYLVPMGLMQSRIKAIAAKHGLDESSPEVAGLLSHALHER
IKTIVEKLAVIAQHRIDALVKTDPRYETTQDVKGQLKFLEELDRVDKKRREDSEREMLLR
AAKSRSKNEDPEQAKLKAKAKEMQRAELEELRQREANLTALQAIGPRKKARLEAGPGGSG
DPTSSGVASTSGFQSGRSQMALRTRLKRINIRDLIYWMEQDRQYMRSETLYRLYLK
NT seq
2691 nt
NT seq
+upstream
nt +downstream
nt
atggcgtcagccgagtttttagagcaagctttgtccacaaacgtcgacgagaacgctgta
aatgcgatagtgggctcattagaaaaccagttagtcacatctgttccgtcagcatcttct
cataacaatatcgtgaacgtttttcctgctcaaaattgtaacattacttcaaacgcgggt
actttaataagtggacaaaagttcattacggaccaaataaactctggtggcatagtgaac
agtatacaatcaaatattgtgtctaactcaaactcaagtgcaccttttaacaatgtgcaa
gcttcaagtccctccacattcacgtccctgtcattgactggtggtgttcctatttccaat
gagacattgaaggtgatatacacgcaagcccaccacctggccaatcatcacaacggtgtc
acgcttcccgtgcaatcgttagcaaacggttgcatcgcgcagccgtcgcagagccagtta
ttgcacgcggtgccggccagcagcgtgttaccacagcagggcaacaaaactatcgccatg
cagcctccactcgtcattaagcagggcacaaatactggccaagtgggtatgcagcctgga
atggtgactgtcccaatgactgtgaactctagcatgcctgcttcaatacctaacgtgatg
acactgaacaagcctggagggcagaacgttgtagtgaccacacagaatttaggctccgcg
cagcccactatcatccctaatgtccaaatattaaacatgagacctggagcgccagcagtg
gcagctcagaagtcagtagcaacagtatcacccagagtggtgattggtacgcctcaagtt
gttggtacgagagcaactgctccaataacgctgcaaactctgcagagtcttcaaccgggg
cagcagggtcatttgttgttaaagactgagaatggtcaataccagctgctgagggtgggc
cccgcgcccgcgaccagcactctctcggcgccgcagcctcagaccatccggctgtcgacc
gtgccggcacacccaggagtagcgacagtatcgaccagcgtggcggcgcccgggccaatg
gcgggccagatgcccgcagcgtcggtggcggcgccggtggtcgcgtcagtaccgagcgtc
gtgcccaccacgcccacggtgcaggcgcctaatgctacaactcacatcaaaccatcggac
aacaccaaagagaaatgccgcaacttcttggctaatttgctggatctatcgagtaaggag
ccgccttctgtggagagaaacgtacggaacctcattcaggagctgattgacgcccaggtc
gagcctgaggagttctgtgaccggctggaaagactccttaatgccagtcctcaaccttgc
ctcattggattcttaaagaaaagtttgccgttacttcgccagtcgctcgtaactaaggag
ctagtgattgagggcatcaaccctccagcgccgcacgtcgcgttttcgaccatccccgcc
cctgcacccgcgcagccggtggccgcaacttccaacgtccaaatgcgcgaggatagctcg
agccccactttgacgcccctcctgccgccggtgttacctctaacactggcgagcaccccc
gcgccttccacaatgtcgattaacgttgcacctgcgacgccctcttcgcctgtgcagaag
ccggcgcagaaaggcggcagcaccattgccgtattgcagaacatcccgcttcacactaag
atcaacgtgaacaaagtgagcagtggaaaggcgatgacagtgaacagcaaggcaaatttt
ccaagatccaccactcccgctggccttaacgctgttctcgctcccggcaaatctctcttg
aaagaaaaagagaagaaatcttcgggccagttctcccagcccttcggagacgataagatg
gcgggcgatgacgacatcaatgatgtcgccgccatgggtggcgtgaacttggccgaggaa
tcacaacgcattcttggctcaactgaaatgatcggaacacagatcagatcttgcaaagaa
gagtacctggtcccgatgggtttgatgcaatcccgcatcaaggctatagcggctaagcac
ggcctggacgaatcgtcaccggaggtggcggggctgctcagccacgcgttgcacgagcgt
atcaagaccatcgtcgagaagctggctgtgatagcccagcaccgcatagacgccttagtc
aagacggaccctcgttatgagactacccaagacgtgaagggtcaactgaagttcttggag
gagcttgaccgcgtcgacaagaagcgacgtgaagactcggaaagggagatgttgttgcga
gctgccaaatcaaggtccaagaatgaagacccggagcaggccaagctgaaggccaaggct
aaggagatgcagcgcgctgagctggaagagctgcgccagcgcgaggccaacctcacggcg
ctgcaggccatcgggccgcgcaagaaggccaggctggaggctgggcccggcggctccgga
gatcccacctccagtggagtcgccagcacctcgggatttcaatctgggcgcagccagatg
gcgctccgcacacgtctgaagcgcatcaacatccgcgatctcatctactggatggagcag
gaccgccagtatatgcgctctgagacactgtaccgtctttacctgaagtaa
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