Trichoplusia ni (cabbage looper): 113504472
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Entry
113504472 CDS
T05757
Name
(RefSeq) probable 28S rRNA (cytosine-C(5))-methyltransferase
KO
K15264
25S rRNA (cytosine2278-C5)-methyltransferase [EC:
2.1.1.311
]
Organism
tnl
Trichoplusia ni (cabbage looper)
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tnl03009
]
113504472
Enzymes [BR:
tnl01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.311 25S rRNA (cytosine2278-C5)-methyltransferase
113504472
Ribosome biogenesis [BR:
tnl03009
]
Eukaryotic type
Other ribosome biogenesis factors
113504472
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltr_RsmB-F
NSUN5_fdxn-like
NSUN5_N
PCMT
FtsJ
Motif
Other DBs
NCBI-GeneID:
113504472
NCBI-ProteinID:
XP_026742575
UniProt:
A0A7E5WP81
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Position
22:4196827..4201218
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AA seq
637 aa
AA seq
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MFEHSVKVPRHYKIAANIFKKVSTEGGSVKSLLYDDKLRHFRTNVLFALITETIKHAGDI
DKIFENSKILENETRLDPWLAKILTAELLFGKKALPGKSKPEQTVLSYKDQFEKYISDHQ
DDLKTEVAPRPRYVRINTNLLTTSDAIRAFQDEGYKFIRCTSGSYADYLEQIQKLTEYDF
TQDYHIKTIFVFAAGTKLHEHELYLENKIILQDKATAMAVHLLAPPPGSVVLDMCAAPGM
KTTQLAAYMRNNGRIFAVERNEKRYQTLSEFVVRTGSTCVETFHKDSLEIKRGDMDDVEY
ILLDPSCSGSGMDFCVHNYIESTRLAKLTSLQEKFLKHAMNAFPKVKRIVYSTCSLFPEE
NERVITNVVKTSRTKWRVQDVKELLKGQWNNVGSGMYGSMGARCMYAKPDSDFTTGFFLA
VLDRDPKDLQKSLDGEKAGKKEKKYKVENGSSDSELSSKKTRDVGEEVNGVQNDMEVEET
KPKKKKKKDKEANENTEPDSTNVDTEYSTETSTKKKKKRKHDEPQPVTQIIEELNELAVE
DEAPKKKKKKDKKREEENTESLVGNNIEEDSEVPKKKKKRKKDLDKTIGEETELTENQVK
KKKSKKDDHELSESVNTGDTSEVSEAPKKKKKKNKGE
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgtttgaacattcagtcaaagtaccaagacattacaaaatcgctgcaaatatctttaag
aaagtctctacagaaggtggaagcgttaagtctttgttatacgacgacaaacttcggcat
tttaggacgaatgtgcttttcgcacttataacagaaacaatcaaacatgcgggtgacata
gacaaaatatttgagaacagtaaaatattagaaaacgagacacgtttagacccatggcta
gccaaaattctcaccgcagaactcctgttcggcaaaaaggctttacctggcaaaagcaag
ccggagcaaacagtcctttcatacaaagaccagtttgagaaatatatttctgaccatcaa
gatgacttgaagactgaagttgcgccacgaccacgttatgtccgaatcaacaccaatctc
cttacaacatcggacgcaatcagagcattccaagatgaaggctacaagttcattcgctgc
acgtcagggtcctatgccgactacctagaacagatacagaaactcacagagtatgacttt
acacaggactatcacatcaagaccatattcgtgtttgcagcgggcacgaagttacatgaa
catgaattgtacttggagaataaaattattcttcaagataaggccacagcgatggctgtc
cacctgctggcgccgccgccagggagtgtcgtgttggacatgtgtgccgcccctggcatg
aagaccactcagctggctgcttatatgaggaacaatggtcgcatatttgccgtcgagagg
aatgaaaaaaggtatcaaacgctaagtgagttcgtagtaaggactggatcgacctgcgta
gagacgtttcataaagactctttggagatcaagagaggtgacatggatgatgttgaatat
atactgctggaccccagttgttctggatcaggcatggacttctgcgtgcacaactacata
gaaagcacacgactagcgaagctcacatcactccaagagaaattcctgaaacacgctatg
aatgcttttcccaaagttaaaagaatagtttacagcacctgttctctattccctgaagaa
aatgaacgcgtgatcactaatgtagttaaaacttctagaactaaatggagagtccaagat
gtcaaagagctgttaaaaggacagtggaataatgttggatctggtatgtacgggagtatg
ggagcaagatgcatgtatgcaaaacctgattcagatttcacaacaggattcttcttagcc
gtccttgatagagatccaaaagatttacagaagagtttagatggtgaaaaagcaggcaag
aaagagaagaaatataaggttgaaaatggaagcagtgatagtgaattatctagtaaaaag
acaagggacgtaggtgaagaagtcaatggagttcaaaatgacatggaggttgaggaaact
aagcctaagaaaaagaagaagaaagataaagaggcaaacgaaaatacagaacctgattct
actaatgtagacacagaatattctacagaaacgtcaactaaaaagaaaaagaaacgcaaa
catgatgaacctcaaccagtaactcaaattatagaagaattaaacgaattagctgtagaa
gatgaagccccaaagaaaaaaaagaagaaagataagaaaagagaagaggaaaacactgaa
tctcttgttggaaataatattgaagaagattcagaagtacctaaaaagaagaaaaagcgg
aaaaaggacttagataagactattggtgaggaaacggaacttactgaaaatcaagtcaag
aagaagaaatccaaaaaggatgatcatgaattatccgaaagcgtaaacactggagatacg
agtgaagtcagcgaagcaccaaaaaagaaaaagaagaaaaataaaggtgaatag
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