Trichoplusia ni (cabbage looper): 113504813
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Entry
113504813 CDS
T05757
Name
(RefSeq) DNA-directed RNA polymerase III subunit RPC1-like
KO
K03018
DNA-directed RNA polymerase III subunit RPC1 [EC:
2.7.7.6
]
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
113504813
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tnl03021
]
113504813
Enzymes [BR:
tnl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
113504813
Transcription machinery [BR:
tnl03021
]
Eukaryotic type
RNA polymerase III system
RNA polymerase III
Core subunits
113504813
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_1
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
113504813
NCBI-ProteinID:
XP_026743076
UniProt:
A0A7E5WSE9
LinkDB
All DBs
Position
23:3894056..3909713
Genome browser
AA seq
1384 aa
AA seq
DB search
MPKEQYRETYVGRKISHVTFNVDSASAIQQAAHIQVITKNLYAQDGQRVPAAYGVLDRRM
GTNQKDANCETCGLGLAECVGHYGYIELALPVFHVGYFRSIITILQTICKVCAKVMLAEP
LKKSFRRKFMNPELSYLHKKNLRAAVLKKAKTCSKCPYCESLNGMVKKSSAGILKIVHEK
YRAKKPTDPLVKRVLKDFHEAKESNKELASMINSGLIIEMSPLEVLNLFRRIPDEDIALL
GMNPKLSRPEDLILTRLPVPPLCIRPSVVSEIKAGTNEDDLTMKQSEILLINDVISRHIA
SGGKSELVQEDWDYLQLHAALYINSEMSGIPLSMQPKKPGRGLVQRLKGKQGRFRGNLSG
KRVDFSSRTVISPDPNLQIQEVGVPVHVAKILTYPERVFPANLQWLRKLVCNGPDLHPGA
NYVQQRGLKHKKYLKYGNREKIAQELKCGDVVERHLVDGDVVLFNRQPSLHKLSIMCHRA
KVQPQRTFRFNECVCTPYNADFDGDEMNMHLPQTEEARAEALILMGNKSNLVTPRNGELL
IAATQDFITGGYLLTQRDTFLSRGEAAQLAACLLAGPDAALPLRLPPPAILKPRLLWTGK
QIFSLIMKPNEKCEVKANLEVKGKNYTGNKDMCVQDSYVIIRNSELLCGSMDKSTLGSGT
KSSIFYILLRDWGEEYAVRGMWRLARMASSYMMNRGFSFGIIDVTPGKKLIEAKNKLLES
GYSKCDGYILEMEKGTLQCQPGCTMEESLEAVMLSELSSIRELAAKACFRELHPTNAPLI
MAQSGSKGSNINISQMIACVGQQALNGKRVPNGFEDRSLPHFERHSKIPAARGFVENSFY
SGLTPTEFFFHTMGGREGLVDTAVKTAETGYLQRRLVKSLEDLVLHYDMTVRNAMGEVVE
FRYGSDGLDPSYMEGRDRPVDLPRVLADVRANYLSREEDPLDGDGIILAAEETLALDDFK
TCTQEFKNELLTFLKEIAEKVRRLRARYARCGSIVKQLQRLTLTQLVQFLRVCHHKYQRS
VIEPGTAVGALAAQSIGEPGTQMTLKTFHFAGVASMNITQGVPRVKEIINASRNISTPII
TAELLQPHDQEFARRVKGRVEKTTLGEITTYIDEVYLPSECFLLIRLDAERIRLLSLEVN
VDSIVYSICTSKLKVKPASVQVVSDWAIKVSGEGRAGWLSHALAQLARALPAVVVKGLPQ
VARAVIAADDNDAIPRYKLCVEGDGLRDVIATYGVDGTKTTSNNILEVYSTLGIEAAKST
IISEIQAVMAGHGMSVDRRHVELLAGQMTARGEVLGITRYGLARMKESVLNLASFEKTAD
HLFDAAYYGQTDSIEGVSESIILGVPAGIGTGVLQLLQAAPRDTPLQTRELLFDVPEYHT
SIWE
NT seq
4155 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaggaacagtatcgagagacctatgtagggagaaagatatctcatgtgacattc
aatgtggacagcgcgtcagctatccagcaggcggcgcacatccaggtcatcacaaagaac
ctatacgctcaggatggacagcgggtgccggccgcctacggagtgctggaccggagaatg
ggtacaaaccaaaaggatgccaactgtgagacatgtgggctgggtttggccgagtgtgtt
gggcactacgggtacatagagctggctctccccgtcttccatgttggctacttcagatcc
atcatcactatactgcagacaatttgtaaagtttgtgcaaaagttatgttagcagaacca
ttaaagaaatcatttcggcgaaaattcatgaatccggagctctcctacttgcacaagaag
aatctccgagctgctgtcctgaaaaaagccaagacctgtagcaagtgtccatactgcgag
tccttaaatggcatggtgaagaagagttcagccgggatattgaagatagttcacgagaag
tacagggctaagaaacctacggacccgttagtgaagcgggtgctcaaggacttccatgaa
gcaaaggaatctaacaaggagttggcatccatgatcaacagtgggcttattattgagatg
agtccgttggaggtactgaacttgttccgtcgcatccctgacgaggacatcgccctgctg
ggcatgaatccgaagctgtcgcggcctgaggacctgatcctcacgcggctgccggtaccg
cccctctgcatcagacccagtgtggtctccgagataaaggctggcaccaacgaagacgat
ctaacgatgaagcagtcagagatcctgctcatcaacgacgtgatctcccgccacatcgcg
agcggcggcaagagcgagctggtgcaggaggactgggactacctgcagctgcacgccgcg
ctatacatcaacagcgagatgtccgggataccgctgtccatgcagcctaagaagcctggt
cgcgggctggtgcagcggctgaagggcaagcagggtcgcttccgcgggaacctctctggc
aagcgcgtggacttctcaagccggactgtcatctcgccggaccccaacctgcagatccaa
gaggtgggagtaccagtccatgtcgccaagatcctcacatacccggagcgggtgttcccg
gccaacctgcagtggctgcgcaagctggtctgcaacgggccagacctgcaccctggcgcc
aactacgtgcagcagcgcggcctgaaacacaagaagtacctgaagtacggaaacagggag
aagatagcgcaggaacttaagtgcggcgacgtggtggagcgccacctggtggacggcgac
gtggtgctgttcaaccgccagccctcgctgcacaagctgtccatcatgtgccaccgcgcc
aaggtgcagccgcagaggaccttcaggttcaacgagtgcgtatgtacaccatacaacgct
gatttcgacggtgatgagatgaacatgcatctgccgcagacggaggaggcgcgggccgag
gcgctcatacttatggggaacaagtcgaacctggtgacgccgcgcaacggcgagctgctg
atcgcggccacgcaggacttcatcacgggcggctacctgctgacgcagcgcgacacgttc
ctgtcgcgcggcgaggcggcgcagctggcggcgtgcctgctggccgggcccgacgccgcg
ctgccgctgcgcctgccgccgcccgccatactcaagcccagactgctctggaccgggaag
cagatcttcagtttgataatgaaacccaacgaaaaatgtgaagtgaaagccaatttggag
gttaaaggcaagaactacaccgggaacaaggatatgtgtgtacaggactcgtatgtgata
ataaggaactcggagctgctgtgcgggtccatggacaagagcacgctgggctcgggcacc
aagagcagcatcttctacatcctgctgcgggactggggcgaggagtacgccgtcaggggc
atgtggaggttagcgcggatggcctccagctacatgatgaacagaggattcagtttcggc
atcatcgacgtcacgcccggcaagaaactcattgaggccaagaacaagctactggagtct
ggttactcgaagtgcgacggctacatcctggagatggagaagggcacgctgcagtgccag
cccggctgcaccatggaggagtcgctggaggccgtcatgctcagcgagctcagcagcatc
agagagttggcggctaaggcgtgtttccgtgagctccatcccactaacgcgccgcttatt
atggcacagagtggttctaaagggtccaacatcaacatatctcagatgatcgcgtgtgtg
ggccagcaggcgctgaacggcaagcgcgtgcccaacggcttcgaagaccgatctctacca
cactttgagaggcactccaagatcccagcagcccgtggcttcgtggagaacagcttctac
tccggtctgacgcccaccgagttcttcttccacacgatgggcgggcgggaaggtctcgtc
gacaccgccgtcaagactgccgagactggctacctgcagcggagacttgtcaagtctctg
gaagacttagtcctgcactacgacatgacagtccgcaacgcgatgggcgaggtggtggag
ttccgctacgggagcgacgggctcgacccctcctacatggagggccgcgaccggcccgtg
gacctgcccagggtgctggcagacgtgcgggccaactacctgtccagggaagaagaccca
ttagacggtgacggtataatcctggctgcggaggagacgctggcactggacgacttcaag
acgtgcacgcaggagttcaagaacgagctgctaaccttcctgaaggagatagcggagaag
gtccgccgcctgcgcgcgcgctacgcccgctgcggcagcatcgtgaagcagctgcagcgg
ctgacgctgacgcagctggtgcagttcctgcgcgtgtgccaccacaagtaccagcgcagc
gtcatcgagcccgggaccgccgtcggcgcactcgccgcgcagagtatcggagagcccggt
acacagatgaccctcaaaaccttccacttcgccggcgtcgcctccatgaacatcacgcag
ggggtgccgcgagtgaaggagatcatcaacgcgtcgcggaacatctccacgcccatcatc
accgccgagctgctgcagccgcacgaccaggagttcgccaggagggtcaagggcagggtc
gagaagaccacgctgggagagatcacgacgtacatagacgaggtgtacttaccgtcggag
tgcttcctgctgatccggctcgacgccgagaggatccgactgctctcgctggaggtcaat
gttgactccatcgtctactcgatctgcacgtcgaagctgaaggtgaagcctgcgagcgtg
caggtggtgtcggactgggccatcaaggtgtcgggcgagggccgcgcgggctggctcagc
cacgcgctggcgcagctggcgcgcgcgctgcccgccgtcgtcgtcaaggggctgccgcag
gtcgcgcgggccgtcatcgctgctgatgataatgatgcgatacccagatacaagctctgt
gtggaaggcgacggtttgcgagacgtcatagctacttacggagtagacggcaccaagacc
acgtctaataatattttagaggtttactcgacgctgggcatcgaggcggccaagtcgacg
atcatcagcgagatccaggcggtgatggcgggccacggcatgagcgtggaccggcgccac
gtggagctgctggcggggcagatgacggcgcgcggcgaggtgctgggcatcacgcgctac
gggctcgcgcgcatgaaggagtccgtgctcaacctggccagcttcgagaagacagcggac
cacctattcgacgcggcgtactacggacagacggacagcatcgagggcgtgtcggagtcc
atcatcctgggcgtgccggcgggcatcgggacgggagtgctgcagctgctgcaggccgcg
ccgcgggacacgccgctgcagacaagggaactgctcttcgacgtgcccgagtaccatacc
tctatatgggagtag
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integrated database retrieval system
