Trichoplusia ni (cabbage looper): 113504900
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Entry
113504900 CDS
T05757
Name
(RefSeq) pinin
KO
K13114
pinin
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl03013
Nucleocytoplasmic transport
tnl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113504900
03015 mRNA surveillance pathway
113504900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tnl03019
]
113504900
03041 Spliceosome [BR:
tnl03041
]
113504900
Messenger RNA biogenesis [BR:
tnl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
113504900
Spliceosome [BR:
tnl03041
]
Complex C
Other components
EJC/TREX
113504900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pinin_SDK_memA
RSB_motif
FlaC_arch
Motif
Other DBs
NCBI-GeneID:
113504900
NCBI-ProteinID:
XP_026743206
UniProt:
A0A7E5WSS1
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Position
23:4684245..4687389
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AA seq
402 aa
AA seq
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MGTEVAISFSSLRAQLENERSSLYKIDENIKKIVQTTGRFNDRFNPAGEYARPHNRLGGR
NLFLDGGNNFKNDDQLAKRKHETKTVFSRLSARVHDSDGEDDGPGIKRARVPSAVCRELP
TRAAVLRAQGDDEQARTRNRRIFGSLLGTLQKFKQEEIVLQTKEEKKAQVERKIEEQARL
EKEREQKERKTLFAERDHKKATIKALEAKMARVQEFEKWEASQKSLANFILTKAKPHIYW
LPKKMSDKANEKLVSSRKYHEKCMIKKRQELQEELQRIEQRCLRPRGPGAKENDPDTHDA
DDKSVEDADVKDERKKRDKFAADADDKEDSDGDDRHDDVPKVEQTSPDQQKAQEETNLNT
GSTEIETAMETEPIKAEPPLDPEPPMDISQNDPVVPADENHS
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atggggacagaagtagcgatatcttttagttctctacgtgctcaattagaaaatgagagg
agtagtttatataaaatagatgagaatataaaaaaaatagtacaaactaccggaagattc
aatgatagatttaatcctgcaggggaatacgcaaggccccacaatcgtttaggtggccgg
aatctgttccttgatggaggaaacaacttcaaaaatgacgaccagcttgctaaacgaaaa
catgaaactaaaacagtttttagcagattgtcagccagagtacatgacagtgatggtgaa
gatgacgggcctggcatcaagagagcccgagtgccttctgctgtgtgtagggagttgccc
accagagctgcagtgctgcgggcacaaggggatgatgaacaggcacggacacgcaaccgg
cgtatatttggatcactcctgggtacactacagaagtttaaacaagaagaaattgtatta
caaactaaggaagaaaaaaaggctcaagtggaacgcaaaatagaagagcaagctcggtta
gaaaaggagagagaacagaaagaaagaaagacattatttgctgagagggaccacaagaaa
gccactatcaaggccctcgaagctaagatggcgcgggtccaagagttcgagaagtgggag
gcctctcagaagagtctggccaacttcatcctcaccaaggcgaaaccccatatatactgg
ctgcccaagaagatgtcagacaaagccaatgagaagctggtttccagtagaaagtaccat
gaaaaatgtatgattaagaaacgtcaagagctccaggaagagttgcagcggatagagcaa
cgctgtctgcggccgcggggcccgggcgccaaggagaacgaccccgacacgcacgacgcg
gacgacaagagcgtggaggacgctgatgtcaaggacgagaggaagaagagggacaagttc
gcggcagatgctgatgacaaggaggacagtgatggagatgacagacatgatgacgtgccc
aaggtggagcagacctcgcctgaccaacagaaagcacaagaagaaaccaatctaaacaca
ggaagtacagagatagaaacagcaatggagacagaacctattaaagcagagcctccgctg
gaccccgagccacccatggacatcagtcagaatgacccggtagtgcccgcagacgagaac
cattcctaa
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