KEGG   Trichoplusia ni (cabbage looper): 113504900
Entry
113504900         CDS       T05757                                 
Name
(RefSeq) pinin
  KO
K13114  pinin
Organism
tnl  Trichoplusia ni (cabbage looper)
Pathway
tnl03013  Nucleocytoplasmic transport
tnl03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:tnl00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    113504900
   03015 mRNA surveillance pathway
    113504900
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tnl03019]
    113504900
   03041 Spliceosome [BR:tnl03041]
    113504900
Messenger RNA biogenesis [BR:tnl03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     113504900
Spliceosome [BR:tnl03041]
 Complex C
  Other components
   EJC/TREX
    113504900
SSDB
Motif
Pfam: Pinin_SDK_memA RSB_motif FlaC_arch
Other DBs
NCBI-GeneID: 113504900
NCBI-ProteinID: XP_026743206
UniProt: A0A7E5WSS1
LinkDB
Position
23:4684245..4687389
AA seq 402 aa
MGTEVAISFSSLRAQLENERSSLYKIDENIKKIVQTTGRFNDRFNPAGEYARPHNRLGGR
NLFLDGGNNFKNDDQLAKRKHETKTVFSRLSARVHDSDGEDDGPGIKRARVPSAVCRELP
TRAAVLRAQGDDEQARTRNRRIFGSLLGTLQKFKQEEIVLQTKEEKKAQVERKIEEQARL
EKEREQKERKTLFAERDHKKATIKALEAKMARVQEFEKWEASQKSLANFILTKAKPHIYW
LPKKMSDKANEKLVSSRKYHEKCMIKKRQELQEELQRIEQRCLRPRGPGAKENDPDTHDA
DDKSVEDADVKDERKKRDKFAADADDKEDSDGDDRHDDVPKVEQTSPDQQKAQEETNLNT
GSTEIETAMETEPIKAEPPLDPEPPMDISQNDPVVPADENHS
NT seq 1209 nt   +upstreamnt  +downstreamnt
atggggacagaagtagcgatatcttttagttctctacgtgctcaattagaaaatgagagg
agtagtttatataaaatagatgagaatataaaaaaaatagtacaaactaccggaagattc
aatgatagatttaatcctgcaggggaatacgcaaggccccacaatcgtttaggtggccgg
aatctgttccttgatggaggaaacaacttcaaaaatgacgaccagcttgctaaacgaaaa
catgaaactaaaacagtttttagcagattgtcagccagagtacatgacagtgatggtgaa
gatgacgggcctggcatcaagagagcccgagtgccttctgctgtgtgtagggagttgccc
accagagctgcagtgctgcgggcacaaggggatgatgaacaggcacggacacgcaaccgg
cgtatatttggatcactcctgggtacactacagaagtttaaacaagaagaaattgtatta
caaactaaggaagaaaaaaaggctcaagtggaacgcaaaatagaagagcaagctcggtta
gaaaaggagagagaacagaaagaaagaaagacattatttgctgagagggaccacaagaaa
gccactatcaaggccctcgaagctaagatggcgcgggtccaagagttcgagaagtgggag
gcctctcagaagagtctggccaacttcatcctcaccaaggcgaaaccccatatatactgg
ctgcccaagaagatgtcagacaaagccaatgagaagctggtttccagtagaaagtaccat
gaaaaatgtatgattaagaaacgtcaagagctccaggaagagttgcagcggatagagcaa
cgctgtctgcggccgcggggcccgggcgccaaggagaacgaccccgacacgcacgacgcg
gacgacaagagcgtggaggacgctgatgtcaaggacgagaggaagaagagggacaagttc
gcggcagatgctgatgacaaggaggacagtgatggagatgacagacatgatgacgtgccc
aaggtggagcagacctcgcctgaccaacagaaagcacaagaagaaaccaatctaaacaca
ggaagtacagagatagaaacagcaatggagacagaacctattaaagcagagcctccgctg
gaccccgagccacccatggacatcagtcagaatgacccggtagtgcccgcagacgagaac
cattcctaa

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