Trichoplusia ni (cabbage looper): 113504955
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Entry
113504955 CDS
T05757
Name
(RefSeq) exosome complex component RRP46
KO
K12590
exosome complex component RRP46
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113504955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tnl03019
]
113504955
Messenger RNA biogenesis [BR:
tnl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
113504955
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Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
Motif
Other DBs
NCBI-GeneID:
113504955
NCBI-ProteinID:
XP_026743276
UniProt:
A0A7E5WSY7
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Position
23:complement(3780805..3783053)
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AA seq
221 aa
AA seq
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MVSENTDLKDFKLRPMKCECNYLSKSDGSAILSQGHTVSLVSVNGPLDVKMQSQSIEKAT
LEVLFSSKGGKPTVGDRYKEHVIRQTCETAILGSLYPRTGITVTIQELEDQGGFLACCIN
CSCLALLNAGLAMRHTFAAVSCAIDESGNIQLDPARDQLDTARANMTFVFDSREKSLVTG
FTEGSYSEDAYSEAVERCRAASHLVFAFYKEIVSKYSNVIG
NT seq
666 nt
NT seq
+upstream
nt +downstream
nt
atggttagtgaaaatacagacttgaaagattttaagttaaggccaatgaaatgcgagtgt
aattacctcagcaaatccgatggctcggctattttatcacaaggacacacagtctctcta
gtcagcgtgaatggccctttggatgtgaaaatgcagagccagagcatagagaaggcaaca
ctggaggtgctgttcagtagtaaaggaggcaagccaacagttggagacaggtacaaggag
catgtaatcagacagacctgtgaaacagctattcttggcagtctataccctcgtactggg
atcactgtcactatacaggagttggaggaccaaggaggattccttgcatgctgtataaac
tgctcctgcctcgccctgctgaacgcggggctcgcgatgcgccacacgttcgcggcggtg
agctgtgccatcgacgagagcggcaacatacagctcgaccccgctcgcgaccagctcgac
acagctcgcgctaacatgaccttcgtatttgatagcagagaaaagtcgcttgttacaggt
ttcacagagggcagttacagcgaggacgcgtacagcgaggcggtggagcggtgtcgcgcc
gccagccacctggtgttcgccttctacaaggagatcgttagcaaatactccaatgttata
ggatga
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