KEGG   Trichoplusia ni (cabbage looper): 113504955
Entry
113504955         CDS       T05757                                 
Name
(RefSeq) exosome complex component RRP46
  KO
K12590  exosome complex component RRP46
Organism
tnl  Trichoplusia ni (cabbage looper)
Pathway
tnl03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:tnl00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    113504955
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:tnl03019]
    113504955
Messenger RNA biogenesis [BR:tnl03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     113504955
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 113504955
NCBI-ProteinID: XP_026743276
UniProt: A0A7E5WSY7
LinkDB
Position
23:complement(3780805..3783053)
AA seq 221 aa
MVSENTDLKDFKLRPMKCECNYLSKSDGSAILSQGHTVSLVSVNGPLDVKMQSQSIEKAT
LEVLFSSKGGKPTVGDRYKEHVIRQTCETAILGSLYPRTGITVTIQELEDQGGFLACCIN
CSCLALLNAGLAMRHTFAAVSCAIDESGNIQLDPARDQLDTARANMTFVFDSREKSLVTG
FTEGSYSEDAYSEAVERCRAASHLVFAFYKEIVSKYSNVIG
NT seq 666 nt   +upstreamnt  +downstreamnt
atggttagtgaaaatacagacttgaaagattttaagttaaggccaatgaaatgcgagtgt
aattacctcagcaaatccgatggctcggctattttatcacaaggacacacagtctctcta
gtcagcgtgaatggccctttggatgtgaaaatgcagagccagagcatagagaaggcaaca
ctggaggtgctgttcagtagtaaaggaggcaagccaacagttggagacaggtacaaggag
catgtaatcagacagacctgtgaaacagctattcttggcagtctataccctcgtactggg
atcactgtcactatacaggagttggaggaccaaggaggattccttgcatgctgtataaac
tgctcctgcctcgccctgctgaacgcggggctcgcgatgcgccacacgttcgcggcggtg
agctgtgccatcgacgagagcggcaacatacagctcgaccccgctcgcgaccagctcgac
acagctcgcgctaacatgaccttcgtatttgatagcagagaaaagtcgcttgttacaggt
ttcacagagggcagttacagcgaggacgcgtacagcgaggcggtggagcggtgtcgcgcc
gccagccacctggtgttcgccttctacaaggagatcgttagcaaatactccaatgttata
ggatga

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