Trichoplusia ni (cabbage looper): 113504974
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Entry
113504974 CDS
T05757
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase II subunit RPB3-like
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl03020
RNA polymerase
tnl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
113504974
09124 Replication and repair
03420 Nucleotide excision repair
113504974
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tnl03021
]
113504974
03400 DNA repair and recombination proteins [BR:
tnl03400
]
113504974
Transcription machinery [BR:
tnl03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
113504974
DNA repair and recombination proteins [BR:
tnl03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
113504974
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
113504974
NCBI-ProteinID:
XP_026743295
UniProt:
A0A7E5WR91
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Position
23:complement(5143908..5144881)
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AA seq
275 aa
AA seq
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MPYANQPXVHITELTDDNVKFIVEDTELSVANSMRRVFIAETPTMAIDWVQLEANSTVLS
DEFLAHRIGLIPLISDDVVDKIRYSRDCMCXDFCSECSVEFTLDVKCTGDQTRHVTTADL
KSSDPRVVPVTSRHRDEDQADYGETDEILIIKLRKGQELKLRAYAKKGFGKEHAKWNPTA
GVSFEYDPDNIMRHTLYPKPDEWPKSEHTELDEDQFEAEFNWEAKPNKFFYNVESSGALK
PENIVLMGIVVLKNKLLNLQVQLAQEAQNDALAIN
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccttacgctaatcaacctnctgtacacattacagaattaacagatgataatgttaaa
tttattgttgaagacaccgaacttagcgtcgctaatagtatgcggagagtgtttatagcc
gaaacgccgacaatggcaatcgattgggtgcaattagaagcaaattcgacagtacttagt
gacgagttcctcgcgcatcgcattggtctaattccgctcatatcagacgatgtggtggac
aaaattcgttactcaagagattgtatgtgcngcgacttctgttcagaatgcagcgttgag
ttcacactggacgtgaagtgtacaggcgaccaaacaaggcacgtgaccacagcagacctg
aagtcgagcgacccacgagtggtgccagtgacgtcacgacaccgggacgaagaccaggca
gactacggtgaaactgatgagattttaattataaagctgcgtaaaggacaagagttgaag
ttgagagcatatgcaaaaaaaggatttggcaaggaacatgctaaatggaaccccacagca
ggcgtgtcctttgaatatgaccctgataacataatgagacacacattataccctaaacct
gacgagtggcctaagagtgagcacaccgagctggatgaagaccagtttgaagcagagttc
aattgggaagctaaaccaaacaaattcttttacaatgtggagtcctccggagcactcaaa
ccagagaatattgtcctcatgggtatagtagtgttgaagaataagcttctaaacttacaa
gtacagttagcacaggaagctcaaaatgatgcattagctattaattag
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