KEGG   Trichoplusia ni (cabbage looper): 113505019
Entry
113505019         CDS       T05757                                 
Name
(RefSeq) DNA polymerase epsilon catalytic subunit A
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
tnl  Trichoplusia ni (cabbage looper)
Pathway
tnl03030  DNA replication
tnl03410  Base excision repair
tnl03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:tnl00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    113505019
   03410 Base excision repair
    113505019
   03420 Nucleotide excision repair
    113505019
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:tnl03032]
    113505019
   03400 DNA repair and recombination proteins [BR:tnl03400]
    113505019
Enzymes [BR:tnl01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     113505019
DNA replication proteins [BR:tnl03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    113505019
DNA repair and recombination proteins [BR:tnl03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      113505019
SSDB
Motif
Pfam: DUF1744 POL2_thumb DNA_pol_B_exo1 zf-DPOE zf_DPOE_2 DNA_pol_B DNA_pol_B_exo2 RNase_H_2 CAP-like_CFAP184
Other DBs
NCBI-GeneID: 113505019
NCBI-ProteinID: XP_026743337
UniProt: A0A7E5WSR5
LinkDB
Position
23:complement(1806343..1830090)
AA seq 2233 aa
MVLQNTGKYRAERDQRDRDDTGKRDAGSSSGPREESSEYRIRVALENDRIDSKYGFDRVR
DVKERTGYLINMHTAEVLDEDKRLVAAMDYYFIEMDGSRFKVSLTFQPYFLILARKECEQ
EVIQFISKRFAGNIHKIDVVEKEDLDLLNHLSGLKQRYIKLSFMSQNEMMKVRREILTAV
NKNKEREKKDQIYAEMLTNALTSAAAIEHAKKTTDHMENILDIREHDVPYHVRVSIDMEI
FCGTWYTIKSRGTETPIFTKRDDIIERPDPIVLAFDIETTKLPLKFPDSQTDQIMMISYM
IDGQGYLITNREIISVDVEDFEYTPKPEFEGHFIIFNEENEQALIQKFFDHIMDVKPHIF
VTYNGDFFDWPFVEARAAALGLDMKQEIGFSKIAARDGTYACRPAMHMDCLCWVKRDSYL
PVGSQGLKAVAKAKLRYDPVELDPEDMCRMAAEQPQVLSNYSVSDAVATYYLYMKYVHPF
IFALCTIIPLEPDEVLRKGSGTLCESLLMVQAFHANIVFPNKQVEELNKLTADGHVLETE
TYVGGHVEALESGVFRADIKCKFKIVPSAIDKLMETTEKTMKHAIEVEEGIPLDLVTNFD
EVCAEIKAKLQHMKDHPRRDENPLIYHLDVGAMYPNIILTNRLQPSAMVNTSVCAVCDYN
RPGASCQRHMDWMWRGDYLPATRSEYQRIQQQLETEKFPPLHPGGPTRAFHALPKEDQAA
YEKKRLADYCRVAYKKTKVTRTEVRTTTICQKENSFYVDTVRAFRDRRYEYKALNKQAKA
KVAEAVASGDAAEIKSAKSREVLYDSLQLAHKCILNSFYGYVMRRGARWHSMEMAGIVCY
TGANIIMKAREIIEQVGRPLELDTDGIWCILPSSFPENVTIHTTHAKKKKINVSFPNAVL
NSMVKDHFTNDQYFELVDPEGKKYEQRSENSIFFEVDGPYLAMVLPASKEEGKRLKKRYA
VFNFDGSLAELKGFEVKRRGELQLIKIFQSSVFEAFLKGNDLKSCYSAVAKVADYWLDVL
YSKGSNMPDSELFELISENRSMSKKLEDYGGQKSTSISTAKRLAEFLGDQMVKDAGLACR
FIISKKPEGAPVTERAIPLAIFQSPAAVKRHHLRRWLKDSSISEDIDIRDVLDWAYYIER
LSGTVQKIITIPAAMQGLDNPVPRCQYPDWLHKKMLAKTDKFKTRKITDMFSAKPKELKE
NGEDEEPSTSADGAMDTEMDIEDIGKDSTEKSTTIRPMVHTVKRKREESPPQDAQNWREA
LGPPPPFGTTKAERTKWILFQKKKWLWQMEQRGLRNRSKRGKMDRDAMPPPKAGPSTTLS
GFIRRAQRTLLNTPWQIIQVAETAEPGLFKVWALVGTELHQIKLSVPRIFYVNQRVPRAA
DSGPHWRKCSRVLPRAHPVLHLYQYSVPEGLYREHQEELTSELCAPEIEGIYETQMSLEF
RVLVQLGCICTVDPQEARKLIQFGSTNMDSFALKQLQFKSVALQPYLQKQDGVPPVKHIY
LYQHSAVNSSRSMWALVLAPVKRAYIYVLDTVKTNQLPNMNTLYQAERTAKINLGADEDT
LPGAELSWEVVIETEARAISRHLQRALQRYKDERCGPTLLALQATLAPHLLMQLMPGLSE
FPIVPIHVRDVETLYSALEWQRIGSRAIVRHYLGLDAVLQLTIEQCRYFHVPLGNMPADP
TLFGADLFYARHLIKHNFVLWCSNMDRPDLGGRETDDNRLVSEVEELAGCSHNAAGAYGS
VCVQLDTDALAVCALLQAHGVLQLEGTCLAAAFGASHASIQDAMASAGSNASMPYDETTQ
CSAAFKILRTMIASWLRDVTQYKNVFADFQISHFYRWLKTPSSLLYDPALRRTLYNLMKK
LFLMLVAEFKRLGSLIVFADFNKILLCTKKNNVLDGIGYVEFVVQSIRNKELFHGIDIRY
KQCWSYLLWLDEANYAGVQGKLPDGLTEVGSSQLPPASEESIGDEEGSITMQWNLSKFLP
APVREPFAAAVAGLLSAAYTQPDQLRALIQGEIAQKLFQVTEKINTRYPVFKPSDIGHQP
GLKPDAFAVDSKPALLYVNAVCKVFSLDPALEDEVTLLRRNLLRLIGVGEFSAAAEWRDA
CNTCPLTEVICKVCNHCRDLDLCRDTNTAIQNDVPVCLCPTCGTPYENQELEWRLVELMN
RRTMSYVLQDLICKRCHQVKRDNMTMVCECAGDFALMLPNKEVLSQLNTFKTIAEYYKMP
LLLELIEFHLSNT
NT seq 6702 nt   +upstreamnt  +downstreamnt
atggtattacaaaacactggcaagtacagagcagaaagggatcagagagatagggatgat
actggcaaaagagacgctggttcgtcatcaggccccagagaagaatcttcggagtaccgt
atcagggttgccctggagaatgacaggattgattctaagtatggattcgaccgagttcga
gatgttaaagaaaggactggttacttgataaacatgcacactgcagaggttttggatgaa
gacaagcgcctcgtagcagcaatggactattacttcatagagatggatggctccaggttt
aaggtgtcgctgaccttccagccttacttcctgatcctagcccgcaaggagtgtgagcag
gaggtcatacagttcatctcaaagaggtttgcaggaaacatacataaaattgatgttgtt
gaaaaggaagatttggatttactcaaccacttatcaggtttaaaacagagatacataaaa
ttatcattcatgtcacaaaatgagatgatgaaagtgagaagggagattttgactgcagtc
aacaagaataaggagagggagaaaaaagatcagatttacgctgaaatgttgacaaatgct
ttaactagtgccgctgctattgaacacgctaagaagaccactgatcatatggagaatata
ttggatattagagaacacgacgtaccataccatgtccgagtttcaatcgacatggagatc
ttctgcggcacttggtacaccatcaagagccgaggcacagagactcccatcttcaccaaa
cgggatgacatcattgagagaccggaccctatagtcctggcgttcgatattgagactacg
aagttgccgctgaagttcccggactcacagacagaccagataatgatgatttcttatatg
attgatggacaggggtacttgataacgaatagagagattatatcggttgatgttgaggat
tttgagtatacgcccaagccggagtttgaaggccatttcataatattcaatgaagaaaac
gaacaggcattgatacagaagttttttgatcatataatggacgtgaaaccgcatattttt
gttacatacaatggtgacttcttcgactggccgtttgtggaagcccgtgcggccgcgctt
ggcctggacatgaagcaagagatcggcttcagcaagatcgctgcgagggacggtacctac
gcctgccgacccgctatgcatatggactgcttatgctgggtcaaaagagattcatacctg
ccagtgggctcccaaggtctaaaggctgttgccaaagcgaagctacgatacgatcccgta
gagttagaccctgaagacatgtgcaggatggcggcagaacaacctcaggtgctgtcaaac
tattcggtgtcagacgcggtcgcgacatactacttgtatatgaagtatgtgcaccccttc
atattcgcgctctgtaccatcatacctttggaaccagacgaggtgctcagaaaaggttca
ggcacgctatgcgagtcgctcctcatggtgcaagcgttccatgcgaacatagtgtttccg
aacaagcaagtcgaggaactaaacaagctcaccgctgacggacacgtgttggagaccgag
acttatgttggaggccatgttgaagctttggagtcaggtgtattcagagccgatatcaaa
tgtaagttcaagatcgtcccgtctgccatagacaagttgatggaaaccacagagaagaca
atgaaacatgccatagaggtagaggagggtatacctttggacctggtgacgaattttgat
gaggtttgtgcggagatcaaggcgaagttgcagcatatgaaggatcatccgaggagggat
gaaaacccccttatatatcacttggatgtcggcgctatgtatcctaacattatattgact
aatagattgcagccgtctgcgatggtgaacacgagcgtgtgcgcggtgtgcgactacaac
cggcccggggccagctgccagcggcacatggactggatgtggcgcggggactatctgccg
gcgacgaggagtgagtaccagcgcattcagcagcagctggagacggagaagttcccgccg
ttacaccccggcgggcccacaagggccttccatgctttgcctaaggaagaccaggctgca
tacgagaagaagagattagcagactattgcagagtggcttacaagaagactaaagtgact
cgaacggaagtgagaacgaccaccatttgtcagaaggagaactctttctatgtggacaca
gtgagagctttcagagatcgtcgttacgaatacaaagctttgaacaaacaagcgaaggcc
aaagtagcagaagcggtggcgagcggcgacgccgccgagatcaagtccgccaagagccgg
gaagtgttgtacgactcgctgcagctcgcacacaagtgtatcctcaactccttctacgga
tacgttatgaggaggggtgctcggtggcacagcatggagatggcgggtatcgtgtgctac
accggcgccaacattatcatgaaggcgagagagattatagagcaggtcgggaggccgcta
gaacttgatactgatggtatttggtgtattctgccttcttccttccctgagaacgtgacg
atacacacgactcatgcgaaaaagaagaagatcaatgtttcattcccgaacgcagtgctc
aactctatggtcaaagatcacttcacgaacgaccagtacttcgagctggtggaccctgag
ggtaagaagtatgagcagcgatcagagaattccatcttcttcgaggtggacggaccgtac
ttggccatggtgctgccggcgtcgaaagaagaaggcaagagactgaagaagcgatacgcg
gtgttcaattttgatgggtctttggctgaacttaaagggttcgaagtaaaacgccgcgga
gagctccagcttatcaagatcttccaatcatcagttttcgaagctttccttaaagggaac
gatctaaagtcctgctacagcgcagtggctaaggtcgctgactactggctggacgtcctc
tacagtaagggctccaacatgcctgactccgaactcttcgagctgatctccgagaaccgg
tccatgtccaagaagttggaggactatggaggtcagaagtcgacgtcgatatctactgcg
aagagattggcggagttcttaggtgatcaaatggtgaaggatgctgggttggcttgcaga
ttcataatatcgaagaagccggaaggcgcccctgtgacggagcgcgcgatcccgctggcc
atcttccagtcgccggcggcggtgaagcgccaccacctgcgccgctggctcaaggacagc
agcatcagcgaggacatcgacatccgcgacgtgctggactgggcctactacatcgagagg
ctcagcgggaccgtgcagaagatcatcaccatacccgccgccatgcaggggttggacaac
ccagtcccacgttgccagtacccagactggctacataagaaaatgctagccaagacagac
aagttcaagactcggaagatcactgacatgttctccgccaagcctaaggagttaaaggag
aacggggaggatgaggagccgtccacgagtgctgatggtgctatggacacagaaatggac
attgaagatatcggcaaggactccactgagaagtcgaccacgattcgtccgatggtccac
acggtgaagcgcaagcgcgaggagtccccccctcaagacgcacagaactggcgcgaggcc
ctcggacctccgccgccgtttggtactacgaaggcagagagaacaaaatggattctattt
caaaaaaagaaatggctttggcaaatggaacaacgcgggctacggaatcgcagtaaaaga
ggtaaaatggacagagatgcgatgccgccacctaaagctggtccctctactacactgagc
ggcttcatacggagagctcagcgaacattgctcaacactccgtggcagataatacaggta
gcagaaacagccgagccgggtctattcaaggtctgggcactagtaggtacagagttacac
caaatcaagttgtcagtaccgcgtatattctacgtgaaccagcgagtcccccgcgcggcg
gacagcggcccgcactggcgcaagtgtagccgcgtgttgccgcgcgctcaccccgtgttg
catctgtaccagtacagcgtgcctgagggactctatagggagcatcaagaggaattaacg
tctgaactatgcgctccagaaatcgaagggatatacgaaactcaaatgtcgttggagttc
agagtgctggtgcagctgggatgtatatgtactgtagaccctcaggaggcgaggaagtta
attcagtttgggtccaccaatatggactcgttcgctctcaaacagttgcagttcaagagt
gtagctctccagccatatttacaaaagcaggacggcgtccccccagtgaaacacatctac
ctataccagcactccgctgtgaactcctcgcgcagcatgtgggcgctggtgttggccccc
gtcaagagagcctacatctacgtactggacaccgtcaagaccaaccagctgcccaacatg
aacactctgtaccaggccgagaggactgctaagatcaacctgggcgcagatgaggacact
ctccctggcgcagaactatcctgggaggtggtgatagagacagaagctcgcgccatcagc
cgccacctgcaacgcgctctgcaacgttacaaggacgagcgttgcggccccacgctgctc
gcgttgcaggccacactagcgccacacttactcatgcaacttatgccagggttatcagag
ttcccgattgtcccgatccatgtccgggatgtagagaccctgtacagcgccctggagtgg
cagcggatcggatcccgggctatcgtcaggcactacctaggactggatgctgtgctacaa
cttactatagagcagtgcagatacttccacgtgcccctgggcaacatgccggccgacccg
acgctgttcggcgcggacctgttctacgcgcgacacctcatcaaacacaacttcgtactg
tggtgctccaacatggaccggcccgacctcggcggcagggagaccgatgataacaggctg
gtgagcgaggtggaggagctggcgggctgcagccacaacgcggcgggcgcgtacggcagc
gtgtgcgtgcagctggacacggacgcgctggccgtgtgcgcgctgctgcaggcgcacggc
gtgctgcagctggagggcacctgcctcgccgccgccttcggggcctcgcacgccagcata
caggacgccatggctagtgcgggttcaaacgcgtccatgccatatgacgagacgacgcag
tgtagcgcagccttcaagatccttcgcaccatgatagcatcctggctgcgtgacgtcaca
caatacaagaacgtttttgctgacttccagatatcgcatttttacagatggctgaagacc
ccctcctccctgctgtacgaccccgccctccgccgcaccctctacaacctgatgaagaag
ctgttcctcatgctggtggccgagttcaagcggctcggctctctcatcgtgttcgcagac
ttcaacaagatactactctgtacgaagaagaataatgtgcttgatgggattggatacgtg
gagttcgtggtgcagagcatccgcaacaaggagctgttccacggcatcgacatccgctac
aagcagtgctggtcctacctgctgtggctcgacgaggccaactatgctggcgttcagggt
aaactgccagacggattgactgaagtcggatcgtcacagttacctcccgcaagcgaagaa
agtatcggagatgaggagggctcaatcacgatgcagtggaacctgtcgaagttcctgccg
gcccctgtccgcgagcccttcgcggcggccgtggcggggctgctgagcgcggcctacacg
cagcccgaccagctgcgcgcgcttatacagggggagatcgcgcagaagctgttccaagtg
acagagaagataaacactcggtacccggtatttaagccgtcggatatcggtcaccagccg
ggactgaagccggatgccttcgccgttgactcgaagccggcgctgctgtacgtcaacgcc
gtgtgtaaagtgttctcattagatcctgcgttggaggatgaggtgaccctcctccgccgc
aacctgctccgcctgatcggtgtgggcgagttcagcgcggcggcggagtggcgcgacgcc
tgcaacacctgcccgctcaccgaggtcatctgcaaggtctgcaaccactgccgggacctc
gacctctgccgggacacaaacaccgccatccagaatgatgtgccagtatgcttatgtcca
acatgcggcactccatacgagaaccaggagttggagtggaggctagtggagttgatgaac
aggaggaccatgtcctacgtgctgcaagacctgatatgtaaaagatgtcatcaggtgaaa
cgcgacaacatgacgatggtatgcgagtgcgccggagacttcgccctcatgctgcccaac
aaggaggtcctctcacaactgaacaccttcaaaacgatcgctgagtactacaagatgcct
ctactgttagaacttatagaatttcatctcagcaacacgtga

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