Trichoplusia ni (cabbage looper): 113505029
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Entry
113505029 CDS
T05757
Name
(RefSeq) eukaryotic initiation factor 4A-III
KO
K13025
ATP-dependent RNA helicase [EC:
5.6.2.7
]
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl03013
Nucleocytoplasmic transport
tnl03015
mRNA surveillance pathway
tnl03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
113505029
09122 Translation
03013 Nucleocytoplasmic transport
113505029
03015 mRNA surveillance pathway
113505029
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tnl03019
]
113505029
03041 Spliceosome [BR:
tnl03041
]
113505029
03009 Ribosome biogenesis [BR:
tnl03009
]
113505029
03012 Translation factors [BR:
tnl03012
]
113505029
Enzymes [BR:
tnl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
113505029
Messenger RNA biogenesis [BR:
tnl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
113505029
mRNA cycle factors
Stress granule specific factors
113505029
Spliceosome [BR:
tnl03041
]
Complex C
Other components
EJC/TREX
113505029
Ribosome biogenesis [BR:
tnl03009
]
Eukaryotic type
90S particles
Helicases
113505029
Translation factors [BR:
tnl03012
]
Eukaryotic type
Initiation factors
eIF-4
113505029
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UTP25
AAA_22
AAA_19
TniB
UvrD-helicase
AAA_30
Motif
Other DBs
NCBI-GeneID:
113505029
NCBI-ProteinID:
XP_026743350
UniProt:
A0A7E5WRE0
LinkDB
All DBs
Position
23:complement(1861836..1864018)
Genome browser
AA seq
405 aa
AA seq
DB search
MTSTEVSYNRKIISEDLSNVEFDTSEDVEVIPTFDSMGLRDELLRGIYTYGFEKPSAIQQ
RSILPIVKGRDVIAQAQSGTGKTATFSISILQSLDTTLRETQVLVLSPTRELATQIQKVI
LALGDFMNVQCHACIGGTNLGEDIRKLDYGQHVVSGTPGRVFDMIRRRVLRTRSIKMLVL
DEADEMLNKGFKEQIYDVYRYLPPATQVVLISATLPHEILEMTSKFMTDPIRILVKRDEL
TLEGIKQFFVAVEREEWKFDTLCDLYDTLTITQAVIFCNTKRKVDWLTQKMQEANFTVSS
MHGDMPQKERDNIMKEFRSGQSRVLITTDVWARGIDVQQVSLVINYDLPNNRELYIHRIG
RSGRFGRKGVAINFVKSDDIRILRDIEQYYSTQIDEMPMNVADLI
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgacttcaactgaagtttcgtataatcggaaaataatatcggaggatttgtcgaatgtc
gaattcgacacaagcgaagatgtggaagttattcccacttttgattctatgggattacgg
gacgaattgctgcgtggaatatacacctatggattcgagaagccgtccgcaatccaacaa
agaagcatattaccaatcgtaaaaggccgcgatgtgatagcacaagctcagtccggtact
ggtaaaactgcaacattttcgatttccatcctgcagtcgttggacacaactttacgtgag
acccaagtcctggttttatcaccaacgcgcgagttggctactcaaattcagaaagtaatc
ttggccttgggtgatttcatgaatgtccagtgccatgcctgtattggagggaccaacctt
ggagaagacatcaggaaattagattatggtcaacatgttgtatctggtacacctggcaga
gtatttgatatgatcaggagacgtgtattgagaacaaggtccataaaaatgctagtactt
gacgaagctgatgagatgctgaacaagggtttcaaagaacagatctatgatgtgtaccgt
tatctgcctccagccacacaggtggtactcatctctgccacacttccccatgagattctt
gagatgacttcaaaattcatgactgatcctattaggatcttggtaaaacgtgacgagttg
acattagaaggaatcaaacagttctttgttgctgtggaacgtgaggagtggaagtttgac
accctatgtgacctgtatgatacactgaccatcactcaggcagtcatcttctgcaacacc
aagagaaaggtggactggctcacacaaaaaatgcaggaagccaacttcacagtcagttca
atgcatggagacatgccgcaaaaggaaagagataatatcatgaaggagttccgttctggc
caaagccgcgtacttatcacaaccgacgtttgggcgcgaggtatcgatgtgcagcaagta
tctctggtcataaactacgacctgccgaacaaccgtgagttgtatatccacagaatcggc
aggtcgggtcgtttcggccgcaagggtgtcgccatcaacttcgtcaagtcagacgacatc
aggattctgagagacatagaacagtactactccacccaaattgacgagatgccaatgaat
gtcgcagatttaatataa
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