Trichoplusia ni (cabbage looper): 113505104
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Entry
113505104 CDS
T05757
Name
(RefSeq) poly(A) polymerase type 3-like isoform X1
KO
K14376
poly(A) polymerase [EC:
2.7.7.19
]
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113505104
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tnl03019
]
113505104
Enzymes [BR:
tnl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
113505104
Messenger RNA biogenesis [BR:
tnl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Poly(A) addition factors
113505104
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PAP_NTPase
PAP_central
PAP_RNA-bind
NTP_transf_2
MTPAP-like_central
Motif
Other DBs
NCBI-GeneID:
113505104
NCBI-ProteinID:
XP_026743422
UniProt:
A0A7E5WT09
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All DBs
Position
24:1952051..1967318
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AA seq
641 aa
AA seq
DB search
MWPASQYSHSNAPIPPNSGKANEHQNQQNLKTLGMTSAISMAGPKPIDIEKTTELKDSLA
PYGVFESEQEMHHRMEVLGSLHRLVRQWIREESLRKNMPPSVADTVGGNIYTFGSYRLGV
HHRGADIDALCVAPRHIDRTDYFASFYDLLKVQPQVKELRAVEDAFVPVIKMNFDGIEID
LLFARLALKEIPDSFDLRDDMLLKNLDQKCVRSLNGCRVTDEILRLVPNINNFRLTLRAI
KLWAKRHGIYSNTLGYLGGVSWAMLVARTCQLYPNALPATLVHKFFLVFSQWKWPQPVLL
KQPDSVNLGFPVWDPRVNISDRFHLMPIITPAYPQQNSTFNVCASTRTVIMEEFRLGLAI
TDEIMLSKCGWERLFEAPNFFSRYKHFIVLLASSASPDDQLQWCGLIESKIRHLITTLER
NSHITIAHVNPECYNSVPLNTNNGQPLALPPGENRNMLEPPRSTGASVPEEPVPEIKKNE
NGEVIANYCSMWFIGLVFEKTNLNVDLTYDIRSFTKAVNYQAENTNMLREGMTIEARHVR
RKQLPQYLSGSLLKRERTASGSKRKHDAAAMPAPHKKTKRLSESSTDEVSVLSYNEDSNS
SNMYEVNLQSGSLPHPLDPERAKPAADKPEPPASSSSIACT
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atgtggccggcttcgcagtactcgcatagcaatgcgccgatcccgcctaactcggggaag
gcgaatgagcatcagaatcaacagaatttgaagactttgggcatgacttctgctatttct
atggcaggtccaaaaccaatagacatagaaaagacaacggaactaaaagactcgctggct
ccatacggcgtgttcgagtctgagcaagagatgcaccatcgtatggaggtgctgggctcg
ctgcaccgcctcgtgaggcagtggatccgcgaggagtcgctccgaaagaacatgccgccc
agcgtggctgacaccgtcggcgggaatatatacaccttcggttcttataggcttggggta
caccaccgcggtgctgatatagacgcgttatgcgttgcgccacgtcacattgacagaaca
gattactttgcgtcgttctatgacctactgaaagtgcagccacaggtaaaagaattaaga
gccgttgaagatgcatttgtaccagttatcaagatgaattttgatggaatagaaattgac
ttgctgtttgccaggctggcgcttaaagaaatacccgattcatttgacctacgagatgat
atgctattgaagaatttggaccagaaatgtgttcgttcactgaacggttgccgggtcacc
gatgagatattacggctcgttcccaatattaataacttcagactcacgctccgtgccatc
aagctgtgggctaaacgtcacggcatctactcgaacacgctgggctacctgggcggcgtg
tcgtgggccatgctggtggcccgcacgtgccagctgtaccccaacgcgctgccggccacg
ctcgtgcacaagttcttcctcgtcttcagccagtggaagtggccgcagcctgtgctgctc
aaacagccggattctgttaacctcggctttccggtttgggatcctagagtgaacatatcg
gaccgtttccacctgatgccgatcataacgccggcctatccccaacagaactcgaccttc
aacgtgtgcgcgtccaccaggactgtaattatggaagaattcagactgggattagcaata
acagacgagattatgctaagcaagtgcggctgggagcgtctgttcgaggcgccgaacttc
ttctcgcgctacaagcacttcatcgtgctgctggcgtcgtccgccagccccgacgaccag
ttgcagtggtgcggactcatcgagagcaaaatcagacatcttataacgaccttggaacgc
aactcacacataacaatagcgcacgtgaaccccgagtgctataactccgtgccgctcaac
actaacaacggacaaccattagcattgccaccaggtgaaaatcgaaatatgctagaacca
ccgcggagtacaggagcgtcagtgccggaagaacccgttccggaaattaaaaagaatgaa
aatggcgaagtgatagcgaactactgttccatgtggttcataggcctggtgttcgagaag
acgaatctgaacgtggacctgacttacgatatccgatcgttcacgaaagctgtcaactat
caagccgagaacactaatatgctgagggaggggatgactattgaggcgcgccacgtgcgg
cgcaagcagctgccgcagtacctgtcggggtcgctgctgaagcgcgagcgcacggcgtcg
ggcagcaagcgcaagcacgacgccgccgccatgcccgcgccgcacaagaagaccaagcgc
ctctccgagagcagcacggacgaagtaagcgtcctatcatacaacgaagactcaaactcg
tcgaacatgtatgaggtgaacctgcagagcgggtcgctgccgcacccgctggacccggag
cgggccaagccggccgccgacaagcccgagccgcccgcctcctccagcagcatcgcctgt
acgtag
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