Trichoplusia ni (cabbage looper): 113505278
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Entry
113505278 CDS
T05757
Name
(RefSeq) E3 ubiquitin-protein ligase AMFR-like
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl04137
Mitophagy - animal
tnl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
113505278
09140 Cellular Processes
09141 Transport and catabolism
04137 Mitophagy - animal
113505278
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tnl04121
]
113505278
Enzymes [BR:
tnl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
113505278
Ubiquitin system [BR:
tnl04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
113505278
Multi subunit type E3
ERAD complex
113505278
LMBR1L-GP78-UBAC2 complex
113505278
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-RING_2
CUE
zf-C3HC4_2
zf-RING_11
zf-C3HC4
zf-C3HC4_3
zf-rbx1
zf-RING_UBOX
zf-RING_5
zf-ANAPC11
zf-RING_16
TTC3_9th
Clusterin
G2BR
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
113505278
NCBI-ProteinID:
XP_026743699
UniProt:
A0A7E5WSY6
LinkDB
All DBs
Position
25:complement(2278921..2301706)
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AA seq
562 aa
AA seq
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MPVTLVDRLPLPNLKVYTAGSVSLLSIAVYYALSVTSDPNWRTNATLGRLDAMEVGDAEQ
RVGPAPGLAPVLVNGTRNFTEQFVDVMTFMMQEPLCMWTLINIAYCSLAVFGFGVQRLVF
GQLRVAEAQRVKDKFWNYVFYKFIFVFGVINVQYMDEVLLWCSWFTLVGFLHLLGQLCKD
RYEYLSSSPSSGGWAHVRLASLLGGILAAAAALLGAAAAWGLPAGRDTFAFMAAECLLVL
VSALHVAARYALQLCEADVAGAAAYYTQLAFDSLALVTELLHVLHMVVYSNMLVSMASLV
LLMQLRHLLHELQARVRRHRLYTSLATHMSRNYPMASKEEVEKNQDNCAICWEPMKEARK
LPCSHLFHNSCLCQWVQQDASCPTCRRALAAAAAPARSPALAAPPNHLFHFDGSRYVSWL
PSFSVEVTRVRPAAALAGAQIDAAVTQLQHMFPQYSRAALAADLARTRSADLTLDNILEG
RLPARAPSPPPAPPAPAPPPPPPRVDASTSVSPLPRAEAGVSGAGAPGAAFPRCAAERES
RLQARKAALVAEARRRYLQRHS
NT seq
1689 nt
NT seq
+upstream
nt +downstream
nt
atgcctgtgacactcgtagataggttgcccttgccgaatctcaaggtttataccgcggga
agtgtttcgctgctttcgatagctgtttattacgcgctgagtgtgaccagtgatccgaac
tggcgcacgaacgccacgctagggcggctggatgccatggaagtaggcgacgctgagcag
cgggtcggaccggcaccagggcttgcaccggtcctcgtcaacggcaccaggaactttacc
gagcagttcgtggacgtcatgacctttatgatgcaggaaccgctctgcatgtggacgctg
atcaacatagcgtactgctcgctggcagtgttcgggttcggcgtgcagcggctggtgttc
gggcagctgcgcgtggcggaggcgcagcgcgtcaaggacaagttctggaactatgtgttc
tacaagtttatcttcgtgttcggcgtcatcaacgtgcagtacatggacgaggtgctgctc
tggtgctcctggttcacgctcgtcggcttcctgcacctgctcggccagctctgcaaggat
aggtacgaatatttgtcgtcgtcgccgagctcgggcgggtgggcgcacgtgcggctggcg
agcctgctgggcggcatcctggccgccgccgccgcgctgctcggcgccgccgccgcctgg
gggctgcccgccggacgcgacaccttcgccttcatggccgctgagtgcctgctggtgctg
gtgtccgcgctgcacgtggcggcgcgctacgcgctgcagctgtgcgaggcggacgtggcg
ggcgcggccgcctactacacgcagctggccttcgactcgctggcgctggtgacggagctg
ctgcacgtgctgcacatggtggtgtactccaacatgctggtgtccatggcgtcgctggtg
ctgctcatgcagctgcgccacctgctgcacgagctgcaggcgcgcgtgcgccgccaccgc
ctctacacctcgctcgccacgcacatgagccgcaactacccgatggccagtaaagaggag
gtggaaaagaaccaggacaactgcgccatctgctgggaacctatgaaggaggcgcggaaa
ctgccctgctcacatctcttccacaactcgtgcctgtgccagtgggtgcagcaggacgcg
tcgtgccccacctgccgccgcgcgctggccgccgccgccgcgcccgcgcgctcgcccgcg
ctcgccgcgccgcccaaccatctcttccacttcgacgggtctcgatacgtgtcgtggctg
ccgagcttctcggtggaggtgacgcgggtgcggccggcggcggcgctggcgggcgcgcag
attgacgcggccgtgacgcagctgcagcacatgttcccgcagtactcgcgcgccgcgctg
gccgccgacctcgcgcgcacgcgctccgccgacctcacgctcgacaacatcctggagggc
cgcctgcccgcgcgcgcgccctcgccgccgcccgcgccgcccgcgcccgcgcccccgccg
ccgccgccgcgcgtggacgccagcacgtcagtgtcgccgctgccgcgcgccgaggcgggc
gtgtcgggcgcgggcgcgccaggcgcggccttcccgcgctgcgcggccgagcgcgagtcg
cggctgcaggcgcgcaaggcggcgctcgtggccgaggcgcggcgccgctacctgcagcgc
cacagctga
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