Trichoplusia ni (cabbage looper): 113505304
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Entry
113505304 CDS
T05757
Name
(RefSeq) nucleoporin SEH1
KO
K14299
nucleoporin SEH1
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl03013
Nucleocytoplasmic transport
tnl04150
mTOR signaling pathway
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
113505304
09130 Environmental Information Processing
09132 Signal transduction
04150 mTOR signaling pathway
113505304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tnl03019
]
113505304
04131 Membrane trafficking [BR:
tnl04131
]
113505304
Messenger RNA biogenesis [BR:
tnl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
113505304
Membrane trafficking [BR:
tnl04131
]
Autophagy
Other autophagy associated proteins
SEACAT/GATOR2 complex
113505304
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Beta-prop_WDR5
Beta-prop_THOC3
Beta-prop_WDR3_1st
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_CAF1B_HIR1
WD40_CDC20-Fz
Beta-prop_WDR3_2nd
Beta-prop_RIG_2nd
Beta-prop_TEP1_2nd
EIF3I
Beta-prop_EIPR1
WD40_MABP1-WDR62_2nd
WDR55
Beta-prop_WDR35_TULP_N
ANAPC4_WD40
Beta-prop_TEP1_C
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_IFT122_1st
Beta-prop_CATSPERD
Motif
Other DBs
NCBI-GeneID:
113505304
NCBI-ProteinID:
XP_026743730
UniProt:
A0A7E5WSG7
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All DBs
Position
25:1412110..1418669
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AA seq
377 aa
AA seq
DB search
MGELTATNLFESQTIFADHKDLIHDVAYDFYGERMATCSSDQYVKVWDSDGNGGWRLTAS
WKAHHGSVWKVTWAHPEFGQVIATCSFDRTAAIWEEVGDTASSGSEKGLRTWLKRSNLVD
SRTSVTDVKFGPKHLGLLLVTCSADGIIRIYEAPDVMNLAQWTLQHEIPTKVSISCLSWN
PSLSRVTHPPMLAVGSDEPNTTNAAATVQSDKTTACNGKVFIYEYSETSRRWTRTDCLAS
VQEPVNDIAFAPNLGRSFHLLAVATKDVRIIKLEPIAESSGANNGAMVRFKVEVVAAFEE
HYSCVWRVGWNVTGTLLASSGDDCCVRLWKMQYLNQWKCVAVFKNEPATGDSPPLCRPST
TYTRLAAMANPAHMPFH
NT seq
1134 nt
NT seq
+upstream
nt +downstream
nt
atgggtgaattaacagccacgaacttattcgaatcacaaacgatattcgctgatcacaag
gatttgattcacgatgttgcgtacgacttctacggcgaaagaatggccacttgttccagt
gaccagtacgtaaaggtatgggattcggatggtaatggtggctggcgtcttacagcgagt
tggaaggcacaccatggatcagtatggaaggtcacatgggcacaccctgagtttggtcag
gtcattgccacatgctcttttgacagaacagctgcaatttgggaggaagttggtgacaca
gcatcatcgggttcagagaaaggtctgagaacctggctgaagagatcaaaccttgtggac
tcaagaacttcagtgactgatgtgaagtttggtcccaaacacttgggactcctactagtc
acatgttctgctgatggtatcataaggatatatgaagcaccagatgtaatgaaccttgct
cagtggaccctgcagcatgagatccctacaaaagtttccatcagctgtctatcatggaac
ccatcattatccagagtaacgcacccgccgatgcttgctgtgggcagtgatgaaccaaac
acgacaaatgcggcagctactgtacagtcagacaagacaacagcatgtaatggaaaggtg
tttatatatgagtacagtgagacatctcggcgctggacgcgaacagactgcttggcgtcg
gtacaggagcctgtcaacgacatcgcgttcgctccaaacctcggcaggtcattccactta
ctggccgtggccactaaggacgtgcgcatcatcaagctagagcctattgcggagtcgtcg
ggcgcgaacaacggcgcgatggtgcgcttcaaggtggaggtggtggcggccttcgaggag
cactactcgtgtgtgtggcgcgtcggctggaacgttacaggcacgctgctcgcctcctcc
ggggacgactgctgcgtcaggctgtggaagatgcaatacttgaaccagtggaagtgtgtg
gcggtgttcaagaacgagccggcgacgggcgactccccgccgctgtgtcggcccagcact
acctacacgcggctggccgccatggccaaccctgcgcatatgcccttccactga
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