Trichoplusia ni (cabbage looper): 113505766
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Entry
113505766 CDS
T05757
Name
(RefSeq) cleavage stimulation factor subunit 2 isoform X1
KO
K14407
cleavage stimulation factor subunit 2
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
113505766
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tnl03019
]
113505766
Messenger RNA biogenesis [BR:
tnl03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
113505766
U7-dependent histone pre-mRNA processing factors
113505766
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CSTF2_hinge
RRM_1
CSTF_C
RRM_10
RRM_7
DUF8400
RRM_Rrp7
Motif
Other DBs
NCBI-GeneID:
113505766
NCBI-ProteinID:
XP_026744373
UniProt:
A0A7E5WU60
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Position
27:complement(30387..35514)
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AA seq
404 aa
AA seq
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MDKSKEKEEQSIMDKSMRSVFVGNIPYEATEEKLKDIFSEVGPVLSFKLVFDRETGKPKG
YGFCEYKDQETALSAMRNLNAYEIGGRSLRVDNACTEKSRMEMQALMQGPQIENPYGEPC
EPEKAPEAISKAVATLPPEQMFELMKQMKLCIQNNPNEARNMLLQNPQLAYALLQAQVIM
RIVDPATAVSMLHPSNPLPPLLQPGDKPPPSNPYIPSNPPPNQPPQMPPLLAAPVPPPNQ
YPLQFEGTISAYPTTRPVAARPALGDVDLRGSRGAAPLLDQDMRSLPPAPHPVPPPQHHA
QDTGFPRDPRLASMQTQSFNSDPRVRPNDPRTQQKIQQMPPGMPSAAQARTIQGIPSGAS
DQEKAALIMQVLQLSDEQIALLPPEQRASILMLKEQIAKSTQQR
NT seq
1215 nt
NT seq
+upstream
nt +downstream
nt
atggataaaagcaaagaaaaagaggagcaaagtatcatggataaatccatgagatccgtg
ttcgtcggtaatataccttacgaggcgacggaagaaaaattaaaagatatcttcagtgaa
gtcggtccggttctgtctttcaagttggtatttgacagagagaccggcaaacctaaggga
tatggattctgtgaatacaaagaccaagagactgccctcagtgctatgcgaaatcttaac
gcgtacgaaattggaggacgatcacttcgagtggacaatgcttgtactgaaaaatctaga
atggaaatgcaagctttaatgcaaggaccacagatagagaatccatatggagaaccttgt
gagccagagaaagctcctgaagctatcagcaaggctgtagccacactcccaccagagcaa
atgtttgaactgatgaagcaaatgaagctttgtatacagaacaaccctaatgaagccagg
aacatgctgctgcaaaaccctcagctagcttatgccctgctgcaggctcaagtgatcatg
aggattgtggacccagccactgctgttagtatgttgcatcccagtaacccactgccgcca
ttactgcagcctggtgacaagcctccaccatccaacccatacatacctagcaacccacca
ccaaatcagcctccgcagatgcctccacttcttgctgctccagtgcctccgccgaatcaa
tatcctctgcagtttgaagggactatctctgcctacccaaccactcgtcctgttgcagcg
cgccccgcgctgggcgacgtggacctgcgcgggtcgcgcggcgcggcgccgctgctggac
caggacatgcgcagcctgccgcccgcgccgcaccccgtgccgccgccgcaacaccacgcg
caggacactggtttccctcgcgatccacggctagccagcatgcagacgcagtccttcaac
tcggacccgcgcgttcggcccaacgatcctcgtacgcagcagaaaatacaacaaatgccg
cccggtatgccgagcgcagctcaggctcgaactatccagggtataccttcaggtgcctcc
gatcaagagaaggctgcccttatcatgcaagtgctgcaactatccgacgagcaaatcgct
ctgctgccgcctgaacagcgagccagtatcctcatgctcaaagaacaaattgctaagagc
actcaacagcgataa
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