Trichoplusia ni (cabbage looper): 113505772
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Entry
113505772 CDS
T05757
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm1
KO
K12620
U6 snRNA-associated Sm-like protein LSm1
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113505772
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tnl03019
]
113505772
Messenger RNA biogenesis [BR:
tnl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113505772
mRNA degradation factors
5'-3' decay
Lsm complex
113505772
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
113505772
NCBI-ProteinID:
XP_026744385
UniProt:
A0A7E5WU71
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Position
27:complement(2214901..2215900)
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AA seq
138 aa
AA seq
DB search
MSSNVNPLAGTAHLLDELDKKLMVLLRDGRTLIGYLRCVDQFANLVLHKTIERIHVGREY
GDIPRGIFIVRGENVVLLGEIDKDKEDNLPLTEVSVDDILDAQRREQDAKIEQQKLLSKA
LKERGLNLLAEMGHDDMF
NT seq
417 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagtaacgttaaccctttagcgggaacagctcatttactggatgaattggacaaa
aagcttatggtgttgctgcgagatgggagaacattaattggttaccttcgctgtgtggac
caattcgctaatttagttctacacaagactatcgaaagaatacacgttgggagagagtat
ggggacattccaaggggtatatttatcgtaagaggagaaaatgttgttcttctgggtgaa
attgataaagacaaagaagacaatctcccattaacagaagtttctgttgatgacattcta
gatgcacaaagaagagaacaggatgccaagattgaacaacaaaagttactttcaaaagct
ttgaaggagagagggcttaatcttctagctgaaatgggacatgatgatatgttttaa
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