Trichoplusia ni (cabbage looper): 113505782
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Entry
113505782 CDS
T05757
Name
(RefSeq) double-strand-break repair protein rad21 homolog isoform X1
KO
K06670
cohesin complex subunit SCC1
Organism
tnl
Trichoplusia ni (cabbage looper)
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tnl03036
]
113505782
Chromosome and associated proteins [BR:
tnl03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
113505782
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GFIT
Motif
Pfam:
Rad21_Rec8_N
Rad21_Rec8
CTD
SMC_ScpA
Motif
Other DBs
NCBI-GeneID:
113505782
NCBI-ProteinID:
XP_026744398
UniProt:
A0A7E5WU87
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Position
27:complement(686059..697236)
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AA seq
931 aa
AA seq
DB search
MFYAHFVLAKKGPLAKIWLAAHWDKKLTKAHVFETNIEKSVDGILKPKVKMALRTSGHLL
LGVVRIYSRKAKYLLQDCNEAFVKIKMAFRPGMVDLPEEHREAAMNAITLPEVFHDFDTA
MPELNEVDIEAQFSLNQSRAEEITMREDYGSLNLVTHDDGFGDMGFDTDNPDIMREAIGS
EGGLEQSNLLFADGSSLELAGKAGGALGPAPALQGPARRMEPAPAHMDDGFGGTIGDVPD
FGHAGGLFEGDLFGEVTGSSSSAAAASGMPGTSAQPQSLQAEIDAAGVSGGETGGDVAAA
DAPDSDDDMGDHYDAGNSPQHSWGGSPVPDSVPPPPAPAPPSPLPHVPMEVDPPAQQSPA
REQAAPAADNTTLLHNDEESFALAPVDATVLKGITKAKRKRKLIVDEVKNISGEEMKNQL
SNTSDIVTTLDLAPPTRRLMHWKETGGVEKLFTLPARPIPSRVLFKKYQRNMTLRSEAEE
GEAARSPDPAEPARRLPRKRRHDESMLPPETPAPSHTADLEPPTPVPQEYEPSVGLAPGA
GGGLTPGALSALLQAGLTPAGLAHGGLAHGGMTPAGLQHGDSQQVDFSSGGLTPAGLHHG
GMTPGLLESGMTPGGLVHGGLTPAGLHHGGMTPGGLDHGGMTPAGLQHGGMTPAGLQHSG
MTPGGLQHGGMTPAGLQHGGMTPAGLQHGGMTPGGLQHGGLTPAGLHHGGMTPAGLQHGG
MTPAGLQHGGMTPGGVQHGALLQHGMEQLPMMPQLGADHVSLLTPADRGSHLPLLAPAER
GGHLPHSLPMEPLLHGLDDHADYQNAMQMTNLGYDDQHGHHSPQHDYDLPLTPENAEEGE
REAGETDEQFEERVLNRRAAQLFAVMKPKLSAGLQLSFTDLAPRHNNRKQVAQKFYSLLV
LKKHQVLKLEQHETYGPITICKGNQFETEAI
NT seq
2796 nt
NT seq
+upstream
nt +downstream
nt
atgttttacgcacatttcgtgctggccaagaagggccccttggccaaaatttggctggcg
gctcactgggacaagaagctcacaaaggcccatgtatttgagaccaacattgagaagtcg
gtcgatggtatcctcaagccaaaagtgaagatggctttgcgtacatccggccatctgttg
ctgggtgtcgtaaggatttactccaggaaggccaagtacttgctgcaggattgtaatgag
gcctttgtcaaaattaagatggccttcaggcccggcatggttgatttgcctgaggaacat
agagaggcagctatgaatgctatcacactgcctgaagtctttcacgactttgatacagct
atgcccgagttaaatgaggttgacattgaggcacagttttcactgaaccagtcaagagct
gaagagatcacaatgcgtgaagactatggctccttgaacttagtcacacatgatgatggc
tttggtgatatggggttcgacacagataaccctgacatcatgcgagaggctattggctct
gaaggtggattggaacagagcaacctgctgttcgcggacgggtcgtcgctggagctggcg
ggcaaggcgggcggcgcgctgggccccgcgcccgcgctgcagggccccgcgcggcgcatg
gagcccgcgcccgcgcacatggacgacggcttcggcgggaccatcggggacgtgcccgac
ttcggacatgctggtggtctgtttgagggtgacttgttcggtgaagtgaccggcagcagc
agctcagccgcggcggcctcgggcatgcctggaacttcagctcagccacagtcactacag
gcggagatagacgcggcgggtgtgagcggcggcgagacgggcggggacgtggccgcggcc
gacgcgcccgactccgacgacgacatgggcgaccactacgatgcagggaactcgccgcaa
cacagctggggtgggtccccggttccggacagtgttccgccgccgcctgcgcctgcgccg
ccatcaccgctgccgcatgttcctatggaggtggaccctcccgcccagcagtccccggcg
cgcgaacaggccgcgcccgccgccgacaacaccacgctgctgcacaacgacgaggagagc
ttcgcgctcgcgcctgtcgacgctacggtactcaaaggtatcacaaaagcaaaacgcaag
cgtaagctgattgtcgacgaagtgaagaatatatccggtgaggagatgaagaatcagctc
agcaatacctctgatattgtaaccacgttggacctcgctccgcctaccagacgcctcatg
cactggaaggagaccggtggagtcgagaaactgttcaccttgcctgctaggccgatacct
tcgagagtcctgtttaagaaataccagcgtaacatgacgctgcgcagcgaggcggaggag
ggcgaggcggcgcgctccccggaccccgccgagcccgcgcgcaggctgccccggaagcgc
aggcatgacgagagtatgttgcctcccgaaacaccagcgccttctcatacagcagacttg
gaacctcccacaccagtgcctcaggagtacgagccttctgtcggcctggcgccgggcgcg
ggcggcgggctgacgccgggcgcgctgtcggcgctgctgcaggccggcctcacgcccgcc
gggctcgcgcatggaggcctggcacatggcggcatgacgccggcaggtctgcaacacggc
gacagccaacaggtcgacttctcctccggcggcctcacacccgccggcctacaccacggt
ggaatgactccaggtttactagagagtggtatgacaccgggtggtctcgtccacggaggc
cttacccctgccggcttacatcacggcggaatgacgccaggaggtctcgatcatggcggt
atgacgccagcaggtctccaacatggtggcatgacgccagcgggtcttcaacacagcggc
atgacaccaggaggactccaacatggcggcatgactcctgcaggactacagcacggtggt
atgaccccggcgggactacaacatggaggaatgaccccaggcggacttcaacacggagga
ctaacgcccgcgggattacaccacggcggtatgactccagcgggattacaacacggagga
atgaccccagcgggactacagcatggcggcatgacgcctggtggcgtgcaacacggcgcg
ctgctgcagcatggcatggagcagctgcccatgatgccgcagctgggcgcggaccacgtg
tcgctgctgacgccggctgaccgcggcagccacttgccgctgctggcgcccgctgagcgc
ggcggccacctgccgcactcgctgcccatggagccgctgctgcacgggctcgacgaccac
gcagactatcagaatgccatgcaaatgacaaacttaggatacgacgatcaacatgggcat
cacagtccgcagcacgactacgatttaccgttgacgccagaaaacgcggaagagggtgaa
cgtgaagcgggcgaaacggacgagcagttcgaagagcgcgtgctaaaccgtcgtgccgca
cagctgttcgcggtcatgaagcccaaactatcggccggactccagctttccttcacagat
cttgcacccagacacaataacagaaaacaggtggcacaaaaattctacagtttacttgta
ctcaaaaaacatcaagtgttaaaattagaacagcatgaaacatatggacctataaccata
tgcaagggtaaccagtttgaaactgaagcgatttaa
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