Trichoplusia ni (cabbage looper): 113505783
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Entry
113505783 CDS
T05757
Name
(RefSeq) vacuolar protein sorting-associated protein 16 homolog
KO
K20180
vacuolar protein sorting-associated protein 16
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl04140
Autophagy - animal
tnl04148
Efferocytosis
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
113505783
04148 Efferocytosis
113505783
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tnl04131
]
113505783
Membrane trafficking [BR:
tnl04131
]
Endosome - Lysosome transport
Tethering complex
CORVET complex
113505783
Hops complex
113505783
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Ortholog
Paralog
GFIT
Motif
Pfam:
Vps16_N
Vps16_C
Motif
Other DBs
NCBI-GeneID:
113505783
NCBI-ProteinID:
XP_026744401
UniProt:
A0A7E5WW71
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Position
27:661210..672648
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AA seq
827 aa
AA seq
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MSALLTADWFMLDSYYRKIDLYNMTWTMDEDLGNMVVSGAPYGGPIAMVRDRKQMVRVMG
VAKPVITIFNGVGSVIAKILWNSGVLVHMGWSDGEQLLCIQESGDVLIYDMFGAYQKTFN
MGQEVRDTKVCKAQLFPNPRGVGLAVITSTNRMFLLSNVSEPKVRSVPDLPRANEPISCW
CAISSGFLVCRDKEIYKCQLGESRAVLMRFDIQNSYTQILSIVASQNGKHVAFFTDSGIL
WIGSADFETKTSEIDTGYIKQPKELMWCGTEAVVAHWDDTMWIYGSKGNKQDFLYDGPFH
LIQEMDCVRVVSESTHELVQKVPQVVEKIFRINSTAAGSYLLEASRQFQNHSHKADEYIR
LVKPDLFTAVQNCIEAAAFEFHPDVQKMLIRAAQFGKCFIMDPELTNFYVKNCRWLRVLN
AVRDPKVAIPLTSVQMGNLGERVLLDRLIWRRLHCLAEHIASYLQLKDGRTRVLSHWACY
KVTQPHLDNESAAREIGEKLRNVPGISYTTIAMKAAEKGRKALAIKILEYETHSKLQVPL
LLSLGEGSIALLKATASGDTDLVYIVLLHLKEKMGKRDFELTIRSYPLAHALYIKYCANN
NREALRQVYVQEDDFHGQATTHIKDAIDQTNPGSIEASLISARECYKKGKNDLGVTVCED
ARKLCKQQSTLQETYGRGYIGLSLHDTVRKLLEHGEIKLADKLRSEYKMPDRRYWWLRIL
TLAEKDDWTELDKFSKSKKSPVGYEPFVDACLKYCKHDEALKYLPRCSDDIKVKYYVKAG
FYEEAAEVAFEQKDESALLFVQNKCPQNEYSKHAKITSLLERLATKK
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atgtcggcgttactaacagcggactggtttatgttggactcctattacaggaaaatagac
ctgtacaacatgacttggacaatggatgaggatctcggcaacatggttgtgagtggtgct
ccatatggaggtcccatagccatggtgcgggataggaagcagatggtgcgagtcatgggc
gttgctaaaccagtcatcaccatattcaatggtgttggaagtgttatagctaagattctg
tggaacagcggagtgctggtccacatgggatggtctgatggtgagcagctgctctgcatc
caagagagtggagatgttctcatctatgacatgtttggagcctaccagaaaaccttcaat
atggggcaggaagttagagatactaaggtatgtaaagcccagctgttcccgaacccgcgc
ggcgtgggtctcgccgtcatcacctccaccaaccgtatgttcctactcagcaatgtttcc
gagcctaaagtcagatctgtgcctgacttaccacgtgccaatgaaccgatatcctgttgg
tgtgccattagttctggtttccttgtgtgcagggataaagaaatctacaagtgccagttg
ggcgagtccagagcagtacttatgcgtttcgacattcaaaattcgtacacacaaatactg
tctatagtagcatcgcagaacggaaagcatgtggccttcttcaccgactccggtatcctt
tggatcggatccgctgacttcgagactaaaacctcagaaattgatactggatatataaaa
cagcctaaggaattaatgtggtgcggtacagaagctgtagtcgcccattgggacgacacg
atgtggatatacgggtctaagggcaacaaacaagacttcctctacgacggacccttccat
cttatacaagagatggattgcgttcgagttgtctccgaatcgacacatgaactcgtgcaa
aaagtcccgcaagttgtcgagaaaatatttaggattaatagtacggccgctggctcgtat
ttacttgaagcttcaaggcaattccagaaccacagccacaaagccgacgaatacataaga
ctagtgaaaccagatctgttcaccgccgtacaaaactgcatagaggcggccgccttcgag
ttccaccccgacgtacagaagatgctgatcagggccgcgcagttcggcaagtgcttcatc
atggaccctgagctaaccaacttctatgtgaagaactgtcgctggttaagagtgttgaat
gccgtcagggaccccaaagtggccataccgttgacttctgttcaaatgggcaacctaggt
gagcgagtgcttctagacaggttaatatggcggcgtctgcactgcctcgcggaacacatc
gcctcgtacctgcagctgaaggatggcaggacgagggtactctcacattgggcgtgttac
aaggtaacacaaccgcacttggacaatgagagtgcggcgcgagagatcggagagaagctc
cgcaacgtgcccggcatctcctacactaccatcgctatgaaagcagcagagaaaggacgg
aaggcactcgctattaaaatattggagtatgaaactcacagtaagcttcaagtaccatta
ctgttgtcattgggagaaggttctatcgcattattgaaggcaaccgccagcggagacacg
gacttggtgtacatagtgctgttacatctcaaggagaagatggggaaacgagactttgaa
ctaacaatccgcagttacccgctcgctcacgccctctacataaagtactgcgcgaacaac
aaccgcgaggctctccgacaggtgtacgtccaggaggacgacttccacggacaggccacc
acgcatatcaaggacgccatcgatcagaccaaccctgggagtatcgaggcctcgcttatt
tccgctagggagtgttacaagaaggggaagaatgatttaggtgtaacagtatgtgaagac
gctcgcaagctctgcaaacagcagtcaactctacaagagacgtacggccgcggctacatc
ggcctgtccctacacgacaccgtcagaaagctgctcgaacacggcgagatcaagcttgcg
gataaactgcgctccgagtataaaatgcctgatagaagatattggtggttacgtatacta
acgttagctgagaaagacgactggacggaactagacaagttctccaagtcgaagaagtct
ccagtagggtacgagcccttcgtggacgcctgcctcaagtactgcaagcatgacgaggcg
ctcaagtacctgccgcgctgcagtgacgatatcaaagttaaatattatgtcaaggctggg
ttctacgaagaagcggctgaagtggcgtttgaacagaaggacgagagcgctctactgttc
gtacaaaacaagtgtcctcaaaacgaatactccaaacacgcgaaaataacctctctactt
gaaagactagctaccaaaaagtga
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