Trichoplusia ni (cabbage looper): 113505932
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Entry
113505932 CDS
T05757
Name
(RefSeq) splicing factor, arginine/serine-rich 15 isoform X1
KO
K13191
RNA-binding protein 16
Organism
tnl
Trichoplusia ni (cabbage looper)
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tnl03021
]
113505932
03041 Spliceosome [BR:
tnl03041
]
113505932
Transcription machinery [BR:
tnl03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
113505932
Spliceosome [BR:
tnl03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
113505932
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
M20_dimer
Motif
Other DBs
NCBI-GeneID:
113505932
NCBI-ProteinID:
XP_026744609
UniProt:
A0A7E5WVQ1
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All DBs
Position
27:complement(3665710..3679000)
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AA seq
1422 aa
AA seq
DB search
MDMSEVKSFNAELSGLYDNKPPISKAKMSAITRGAIKAIKFYKHVVHSVEKFIQKCKPEY
KVPGLYVIDSIVRQSRHQFGQDKDVFAPRFAKNMQQTFANLFRCPPEDKRNIIRVLNLWQ
KNNVFSPQVIQPLLDMADPNHPLHQEIQQQQNNTANGSSLNLSHNASDSKSSPVQQLHTP
HTSSPMGDQFQDQPSGQPAKFNRKLLNDFEYESEDDAPPEPSGGHSGHSGHSGHSGHSGH
SGHNTQNAAEALGRILTNPEIMRQLQSLQAEMQIMTGMQIPNLMPVMSDLQMQQNQNQSL
PFMNSQQDSQKQNDTKDDMVESDIEFVETGPQVIEIPDANDSSPSPKSRRHRSRSKSPRR
RRRSSRSRSRSPRRKRDRDRDRDRERDKERDKEKNHKEREAEREKQREREKKGLPPIKKE
NLSVCSTTLWVGHLSKLATPEELWDLFGALGGVASIDVVAPRGCAFVVMERRRDAARALA
RLHRHKLHCKEITVAWAPPKGVKGRDWKDYWEAEAGVAYLPWPALHKRWALGALSLDALE
DGGAVDEDTLPPWLPPRILPKSMMDNMSMLGMAGGGAGLLPGLGVPLAPASLPASLPPAP
APSLNMPVPRMPPPGMTAGLPAGLAGLPPTLRPPSLPNMSSAPGLPGLQNDTGLPPSGPL
LRFPPGMPPQSIPQPGMVGGVAGFLGGLLGVGVGVGGLVGGVPLLHHAPLLPARDTPPPA
RPQHRNSDVNHSDDAMDLDTEDAHGDETAPDNSDNSGPPPALLPDQIQQLLKKPPPNFNS
SEPPPGFNISEPPPFNVNQPPPDEKQEDERKDRDRERRGERDRDRDRRDRDRRDRGENRP
DNRERRDRDRGRDRDRERDDRRDRDRDRGRDRRDRDRDRDRERGERFGSRDNNRERPGSR
EKSPRAAAGPEPGEKTLQERLWEMANGKPRDDKRDDAPDAGAEGAAPEAGWAQLAPPRLP
PPHHAPHFRAELRMRGPPRPPMSGPWLDGPGPGPGPFGPRFNGMGPPFNRPPFDGPRPPF
DGPPMFEGGPRFERPPFARMPFDGMNRPPFDGPRPPFDGPRPPFDGPRPPFEGPRPPFEG
PRPFDGPPFDGERPPFDGPPRFEGPPEFYDRPRRFDDRDQYGERGWSGDRERDWGDRPDR
PDRPDRPDRRPDWEDRRRDRRPREHDDNRFNNRPQDRPDRRRTFDENQQNRQSRPPREDR
NDRNNPRRDRDRKSRWGAAEEAEANGNDDSEKPQEASETARDEASNDATSAEASEPVETS
QDEQSVQMADAEQNDSIASEGTEVESERRDEPRLERTESPEPPAREDTTEDRNYDAENSK
QEFSPLQTEPEPVAETRNELPDTMYDTNDPIDTSFAAAASPGNNDEEMRAASPLFEKQIG
EPVAEVQKTVDMFSPEREHSESVPDVEAGDAHSDADSKEGAA
NT seq
4269 nt
NT seq
+upstream
nt +downstream
nt
atggatatgtcggaagttaaatcgttcaacgcggagttatccgggttgtacgacaacaaa
ccgcctatatctaaggcaaaaatgagtgcaatcacaagaggtgctataaaagccatcaag
ttctataaacatgtagtgcacagtgttgaaaagtttatacaaaagtgcaagccagagtat
aaagtacctggtctttacgtgatagactctattgtgcgacagtcgcggcaccagttcggt
caagataaggatgtgtttgcgcctagatttgcgaagaacatgcaacaaacattcgcaaac
ctcttcagatgtcctccggaagataagcgcaacataataagggtattgaatctgtggcaa
aagaacaatgtattcagcccacaagttatacaacctcttcttgacatggctgatcccaat
catcctttacatcaggagatacagcagcaacaaaacaatactgctaatgggagcagcctg
aacttgagtcacaatgcttcagatagcaaatcatcaccagtacaacaactgcacactcca
catacttcatcaccaatgggtgatcagttccaggatcaaccatcaggtcaaccagctaag
ttcaacaggaagctgctgaatgactttgagtatgagagtgaggacgatgcaccgcctgag
ccgtccggtggtcacagcggacacagtggccacagcggacacagcggacacagtggacac
agtggacacaacacacaaaatgctgctgaggccctgggaaggatattgacaaatccagaa
attatgagacaactgcaaagtttgcaggcagaaatgcaaattatgactggaatgcaaata
cctaatttgatgccagtgatgtctgatctacaaatgcaacaaaatcaaaatcaaagcctt
ccatttatgaattcccagcaagattctcagaaacaaaatgacacaaaagatgacatggtt
gagtctgacatagagtttgttgagactggcccacaagttatagaaattcctgatgctaat
gattctagtccatcgccgaaatcacggagacatcgatcgaggtcaaagtcaccgcgacga
cggcggaggtcgtcgaggtcacggtcaaggtcgccgcggagaaagcgggatcgtgacaga
gatagagatagagaaagggataaggaaagagataaagaaaagaatcacaaagagcgtgaa
gctgagagagaaaagcagagggagagggaaaagaaaggattaccaccaataaagaaggaa
aatctaagtgtgtgcagcacgacgctgtgggtggggcacctgtccaagctggccacgccc
gaggagctgtgggacctgttcggcgcgctgggcggcgtggccagcatcgacgtggtggcg
ccgcgcggctgcgccttcgtcgtcatggagcgcaggcgcgacgccgcgcgcgcgctggcg
cgcctgcaccgacacaagctgcactgcaaggagatcaccgtggcctgggcgccgcccaag
ggcgtcaagggccgcgactggaaggactactgggaggccgaagcgggcgtggcctacctg
ccctggcccgcgctgcacaagcgctgggcgctgggcgcgctgtcgctggacgcgctggag
gacggcggcgccgtggacgaggacacgctgccgccctggctgccgccgcggatcctgccc
aagtcgatgatggacaacatgtcgatgctgggcatggcgggcggcggggcgggcctgctg
ccaggcctgggcgtccctctggccccggccagcttgccggccagcttgccgcccgcgccc
gcgcccagcctcaacatgccagtaccgagaatgccgccgcccggcatgactgcgggcttg
cctgcagggctggccggcctgccgcccacgctgcggccgcccagtctccctaacatgtcc
agcgcacccggtttgccaggtttgcaaaacgacacaggtcttccaccttcgggcccgctg
ttgaggttcccgcctggaatgccgccgcaatccattccacagccaggcatggtaggcggt
gtggctgggttcctgggcgggctgctgggcgtgggcgtgggcgtgggcgggctggtgggc
ggcgtcccgctgctgcaccacgcgccgctgctgcccgccagggacacgccgccgcccgcg
cgcccgcagcataggaacagcgacgtgaaccacagcgacgacgccatggacctggacacg
gaggacgcgcacggcgacgagaccgcgccggacaacagcgacaacagcggcccgccgccc
gcgctactgcccgaccagatccaacaactactaaagaagcctccaccaaacttcaattct
tcggaaccgcctccgggcttcaatatatcagaaccgccacctttcaatgtgaaccagccg
ccgccggacgagaagcaggaagacgagaggaaagacagggacagagagaggcggggagag
cgggacagggatagagaccggcgcgacagggacaggcgggaccgcggagagaacaggccc
gacaacagggagaggagggaccgggaccgcgggcgggatagagatcgcgaacgtgacgat
cgtcgtgatcgcgacagggaccgcggtcgcgacaggagggaccgagaccgggatcgagac
agagaaaggggagaacggtttggatcaagagataataatagagagcgccccggcagccgc
gagaagtctccccgcgcggcggcgggccccgagccgggcgagaagacgctgcaggagcgg
ctgtgggagatggccaacgggaagccgcgcgacgacaagcgggacgacgcgcccgacgcc
ggcgcggagggcgcggcccccgaggcgggctgggcgcagctggcgccgccgcgtctgccg
ccgccgcaccacgcgccgcacttccgcgccgaattaagaatgagaggaccgcctaggccc
ccgatgtcaggaccgtggcttgacgggccgggacctggaccagggccatttgggccgcga
ttcaacggcatgggcccgccattcaaccggccgcctttcgacggcccgcgcccgccgttt
gatggtccgcccatgttcgaaggtggcccgcgcttcgaacgccctcctttcgctcggatg
ccattcgacggaatgaatcgtccaccttttgacggacctcggccgccgttcgatggaccg
cgtccgcccttcgacgggccacgcccgcccttcgaaggcccgcgcccgcccttcgagggt
ccgcgaccgtttgacggtcctcctttcgatggtgagcgaccaccattcgacgggccaccg
cgttttgagggccctccggagttctatgaccgaccgcggagattcgacgaccgcgaccaa
tacggagagcgcggctggagcggcgaccgcgagcgggactggggagaccgaccggaccga
cctgaccggcccgacaggcccgaccgccgccccgactgggaggaccgccgcagggaccgc
aggccccgcgaacatgacgacaataggtttaacaacaggccgcaggaccgccccgaccga
aggagaacttttgacgaaaatcaacaaaacagacaatctagaccgcccagagaggatagg
aacgacagaaacaatccaaggcgggacagagataggaagtctaggtggggtgccgccgaa
gaggctgaggctaatggcaatgatgatagtgagaagccacaagaagccagtgaaacggct
cgagatgaagccagcaatgatgcaacaagcgctgaagctagcgagcctgtagaaactagt
caagatgaacaaagtgtacaaatggctgacgccgagcagaacgacagtatcgcgtcagag
ggaacagaggtcgagtctgaaaggcgagatgaacctcgacttgaaagaacagaatctcct
gaaccgcccgctagggaagataccacagaagaccggaactacgatgcagagaacagtaaa
caggagttctcgcctttacaaacagaaccagagccggtcgctgaaactaggaatgaatta
cctgataccatgtacgataccaacgatcctatcgatacaagcttcgcagcggccgcgtct
ccaggtaataacgatgaggaaatgcgagcggcaagtcctctgtttgaaaaacaaatcggt
gaaccagttgcagaggtacagaaaaccgtcgacatgtttagccccgagagggagcacagc
gagagcgtcccggatgtggaagccggcgacgctcacagtgacgccgacagcaaggagggc
gccgcttga
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