Trichoplusia ni (cabbage looper): 113505959 Help Entry 113505959         CDS       T05757                                  Name (RefSeq) spatacsin   KO K19026   spatacsin Organism tnl  Trichoplusia ni (cabbage looper) Brite KEGG Orthology (KO) [BR:tnl00001]  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03400 DNA repair and recombination proteins [BR:tnl03400]     113505959 DNA repair and recombination proteins [BR:tnl03400]  Eukaryotic type   DSBR (double strand breaks repair)    HR (homologous recombination)     Other HR factors      113505959 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Spatacsin_C Motif Other DBs NCBI-GeneID:  113505959 NCBI-ProteinID:  XP_026744645 UniProt:  A0A7E5WUY5 LinkDB All DBs Position 2:7736219..7746791 Genome browser AA seq 1955 aa AA seqDB search MEGLTQNEKIIWSCWKEKSPRDVVREAAAKGTHIELAISYLMDKNGWNESTARDWFLAEV KAWTVQLLSRKQIFKVLHILNKVKINPEQHLMSLAEDSAQIEYRDFIVEQIEKLAKDMNS ESLSKWQNFKRHWNLLRYLEKSFECDGTFKQNKVFGTGKERIVVNESEIKALTIEKIEKY PQQWKSRIATALFFNSFEFSLLDFSAPFEMWNYLVENNKAMILVRWINVQTSEVVRDMNA RYNFFNNDGFVKKLLNVDTIGFDTHVLENLDGIFRKWSVTNEMIENIAKSNCFDYTKLCI YDTLSSYGIVNETERNNLYLILSRLSRTQNLKLIDDIFTESCSTISREHFYVELAKYCVK NKLYKVLTLCVEGNILDTDLSDVEKEAKDCIELWLLFKSIEQTSDRQSHVLPVYKTCVQI ANENIDDYVSSNPHLVLGMILLEDTKQLFDIFSKEDFLQFKDFKLPNQIYKDKLPHLYNV YKKYSDVNQTYEAKDVNVYQLLSGYRGLDVSKIFEFQLVNQNTNSLITDKPDRRSLGSLL SSDVDVKAASIKALTQRAMEMPDFADEKLMKKYGYVAKLNHVYYLKQYRPCNASQAFVSQ QYQMYNRLQEKSVKSACCEAHALALHNWFDGAMTACTVSFIAMIGCNPTRCRVHISAAKM IRHHMMEYRGYPEEKANKMVNEYMSKLVQSNDEAAKEMLRYLEEITLSKLAESQKLDGKV DMSLVLYESQTMVKFATLHHLPLPEQQLREFVKANSWFNFLLFGDVFRYPLSQMLQLSQE FEKKSYAEHLKHIMLHRSSEDVFEKDTKLSSSNGQRRASRMNSMEVSPTQGCSFEFPTSA YMGRELWEVAAACHGPEDPPAALLRAADICREPLLVLIASCYEPNAVDVLWPQWILSSLS PSARSQDVLQQLMTQQHAAAEQFQKVAELCLLKGYITTLHEAMLIFMPESPLTLFTSFLH RCIRHHTFDAETNKLLTSFLQQSQRKYSVGGSATPWQLSKEALQKVAVALVKIALTHNFD SAYHQREFLKCLAVNQFEKGLMVPSPKFSTLYEILQISMETSLAVNISKMLQDDSQKYLE ECVEMYTINKNYDVALKIAKLSGVSLLSFNSILIVEWSCKYENLVAKDDMIDERAITFFI AECSEAFKKAAVSFAEATEFLVSHVKHISDTSQKFYAYRIIMSWFEENLEYGRRREEIEH LMWDAYFKSESQSSIFLNSYQSTLHFIMNGQKDPNISSKIGQANAEKPFSMMLDEIEIES DVSNIEKVVLLEEPEAIDCWRRVMNQLLSLKLLVDAFRLSALFKSPPEYRYRPPACPVQI VRTCLKLAEGTCSPYELPQELRLVISSPMLQNKLSISGISDASFEELVVIQEKQENIPES AHLAAREEADRLSALDALAVRSGLTLAKQVASYFRIALQIGWDYTSVLKYQNRAVDFINL VSGRARMSLANLVFKTFNIPSKQVAEYLCKEIVAAIISPHLVKTSTFKQKEHFQYTLWGY ALNADIEMFLNMRPDACSHIGRLILDHLMAFQKIYKCSGNSKQPDNLLDDSGLDVENLID EEYQNVEGDEAESVLTEEGTIMSAETESVYSVSTVYTAGNKMTRDSRRNLFDVINKNNVH IRYEVKSNIRKITKGAKLSTKQVNIICLELLVVAHECFACACDTEGVATALRSAQALAAR LLAARSWRLMVRLLTGLARYTECAYVFQALRDNHQFEFLLGQFDYMLGQQVDKIAEFKQG LLDFLKTHCPGDTDTYIMVALHFNMYAEAANVKRKQALNLIDDLEKMALDAAKATSKKPF QPPTWLQIHDNVSTRSLLDTALIHCTDAAELYLQGGCTGFAGEMAALAQQIALQISLLNA SPTRLILNRSTEQMYRLVSEYLSFMEGLVLLAGRGGEAWRELSYRRTLTNDQAYLRDMAM YRPDVAHDFLNRYKTERNKTTVSQAAMTELRNLCR NT seq 5868 nt NT seq  +upstreamnt  +downstreamnt atggagggactgacacaaaatgagaaaattatatggtcatgttggaaagagaaatctcct agagatgtggtcagggaggctgctgccaaagggactcacattgagctggctatcagctat cttatggacaaaaatggatggaatgagtctactgcccgagattggtttctggccgaggtc aaagcctggactgtccagctcttatcaagaaagcaaatcttcaaagttctgcacatacta aataaagttaagataaacccagaacagcatttaatgtctcttgctgaagactccgctcaa atagaatacagagatttcattgtagagcagatcgaaaagttagcaaaggacatgaacagt gagagcttatcgaaatggcaaaactttaaaagacattggaaccttctgcggtacctagaa aagtcttttgagtgtgacggtactttcaagcagaacaaagtgtttgggacggggaaggag cggattgttgttaacgagagtgaaataaaagctttgaccattgagaaaattgagaaatat ccacaacaatggaagagcagaattgccactgcactgttttttaattcatttgaattttct ctactagatttctcagcaccatttgaaatgtggaactatctagtagagaacaataaagct atgatcttagtccgctggatcaacgtgcagacttccgaggtagtccgcgatatgaacgcc cgatacaacttctttaacaacgacggtttcgtgaaaaagctcctgaacgtcgacactata ggtttcgacacacacgtgttggaaaacctcgacggtatattccgtaagtggtcggtcact aatgaaatgatcgagaacattgccaaaagcaactgctttgattacaccaaactttgcatt tacgacactttgtcctcatacggcattgtaaatgagaccgaacgaaacaatctctattta attctctcaagattgtcacgcactcaaaatttgaagctaattgacgatatttttactgaa tcttgttctactatcagtagggagcatttttatgtcgagctagcaaaatactgcgtcaag aataagctgtacaaagtattgactttatgcgttgaaggtaatatattagatacagattta tctgacgtggaaaaagaggctaaagattgtatagaactgtggttgctattcaagagcatt gaacagacatccgacagacaaagtcacgtactgccagtttacaaaacttgcgttcaaatt gccaacgaaaacatagatgactatgtttcctctaacccacacttagtcctcggaatgata cttcttgaagatactaaacagctatttgatatattctccaaagaagattttttacagttc aaggactttaaattgccaaaccaaatatataaggataagcttccacatttgtataatgta tataaaaagtactctgatgttaaccaaacatatgaggcaaaagatgtgaatgtttatcag ttgttatctggataccgaggtctagatgtgtccaagatatttgaatttcaactggtgaac cagaatactaacagtttgattactgataaaccggacagacgcagcttgggtagcctgctg tcaagcgacgttgatgttaaagcggccagtataaaagctttaacgcaaagagctatggag atgcccgacttcgccgacgaaaagttaatgaaaaagtatggctatgtggctaagctgaac catgtttactacttaaaacaatatcgaccatgcaatgcaagtcaagcgtttgtctctcaa cagtaccaaatgtacaatcgcttgcaggagaagagtgtgaagagtgcttgctgcgaagct catgcgttagctttacacaactggttcgacggagctatgacggcttgcacagtatctttc atcgctatgataggatgtaacccgaccagatgcagggttcatatttcagctgcaaaaatg atcagacatcacatgatggaatacagagggtatcccgaagaaaaggcaaacaaaatggtt aacgaatacatgtcgaaattagttcagagcaatgacgaggccgctaaagagatgttgcgt tacttggaagagataacgttaagtaaactggctgaaagtcagaagttggacgggaaagtc gatatgtcgctggttctgtatgaatctcagacgatggtgaagtttgctacgttgcaccac ctgcctctaccggagcagcagctaagggagttcgtgaaggctaactcttggtttaacttt ctccttttcggcgacgtgttccgataccctctcagtcagatgttgcagctatctcaggag ttcgagaagaagtcgtatgcggaacacttgaagcatattatgttgcacaggagctctgaa gacgtgtttgaaaaggatacgaaactgagttccagtaacggccaacgccgagcttcaagg atgaactccatggaagttagtccaacccaaggatgtagttttgaattccctacgagtgca tacatgggtcgtgagctctgggaagtggcggccgcttgtcatggccccgaggacccgcct gctgctctacttagggccgcagatatatgcagggaacctcttctcgttcttattgctagt tgttatgagccaaatgcagtggatgtcctatggcctcaatggatcttatcatcgttgtct cccagcgcccgatctcaagacgtactgcagcagttgatgacacaacagcacgcggccgct gagcagttccaaaaagttgccgagttgtgtttattaaaaggatatataactacgctgcat gaagccatgcttatctttatgccggagagccctcttactcttttcacatcgttcctccac cgatgcatccgccatcacactttcgatgccgaaacgaacaaacttctaaccagcttcctg caacaatcgcaaaggaagtacagcgttggtggtagtgctacgccttggcaactgtctaag gaggccttacagaaggtagctgtggcgctcgtcaaaatcgctttgacacataatttcgat agcgcctatcatcagagggagttcctcaaatgcttagctgtgaatcagttcgagaaagga ttaatggtcccgtcaccaaagttttccacgttgtacgaaattcttcaaatctcaatggaa acgtcattagccgtcaacatctccaagatgcttcaagatgactcccaaaaatacttagaa gaatgcgtagagatgtacacaatcaacaaaaattacgacgtagcgttaaaaattgcaaag ttatccggcgtttcattgcttagcttcaatagtatcttgatagtggaatggtcgtgtaaa tatgagaatttagttgcaaaagatgatatgatagatgaaagagctataacattctttata gcagagtgtagcgaagcctttaagaaggcggcggtctcattcgcagaagcgacagagttc cttgtgtcacacgttaaacatatctcggatacgtctcaaaaattctacgcatacagaata ataatgagttggttcgaagaaaacttggaatacggaagaagacgggaagagattgaacac ctcatgtgggacgcgtacttcaaaagcgaatctcaaagtagcatcttcctaaacagttac caaagcactttgcactttattatgaacggacagaaggatcctaatatttcgagtaaaatt gggcaggcgaacgcagaaaaaccattctctatgatgctagatgagatagaaatagaatca gatgttagtaacatagaaaaagtggttcttttagaggagcctgaagctattgactgttgg agacgagttatgaaccaattgctatcattgaaacttttggtagacgctttcaggctttca gctttatttaagagcccaccggaatataggtacagacctccagcttgtccggtacagatt gtgaggacttgtttgaagctggctgagggaacgtgctcgccgtacgaattgccgcaagaa ttgaggctcgttatatcctctcctatgctgcaaaataaattgtccatatcaggtatatca gacgccagttttgaagaattggtggtgattcaagaaaagcaagagaatatacctgaaagc gcccacctagcagctcgcgaggaagcagacaggctgtcagcattagacgcactcgctgtt aggagtggcctgacgcttgctaagcaagtagccagttacttccgtatagcgctacaaatt ggttgggactacacgtcggtcttgaagtatcagaaccgcgcggttgatttcatcaactta gtcagtggacgagccagaatgtcactcgccaatcttgtattcaagacatttaatattcca tcgaagcaggtagctgaatacctctgcaaagaaatagttgcagctataatatctcctcac ctggtgaaaacatcaaccttcaagcagaaggaacatttccaatacactctctggggttac gctctgaacgcggacatagaaatgtttctgaacatgcgtccggacgcctgcagtcacatc ggacgactgatcctcgaccacctaatggccttccagaagatctacaaatgttcggggaat tcgaaacaacccgacaatttactcgacgacagcggtttggatgtcgagaatttaattgat gaggaatatcagaatgttgaaggtgatgaagcggaatccgttcttactgaggaagggact attatgtctgctgaaactgagtccgtgtactcagtgtccaccgtctacacagccgggaat aaaatgacgagagattccagaagaaatctgtttgatgtcatcaataagaataatgttcat atacggtatgaggttaagtcgaatatcaggaagataactaaaggcgcgaaattgtcaacc aaacaggtgaacataatctgcctggagttgctagttgtcgctcacgagtgtttcgcttgc gcgtgcgacacggagggcgtggccacggcgctgcggtccgcgcaggcgctggcggcgcgc ctgctggccgccaggtcgtggaggctcatggtgcgtctgctgaccggcctggcgcggtat accgagtgcgcttatgtgtttcaagcgttacgtgacaaccatcaattcgagttccttctc ggccaattcgactacatgcttggtcagcaagttgataagatcgctgagttcaaacaaggc ttactggacttcctgaagacccactgtcctggcgacacagacacctacataatggtcgcc ttgcatttcaacatgtatgctgaagccgctaatgtcaagaggaaacaggcgctgaatttg attgatgatctggagaaaatggcgctcgatgctgcgaaggccacatcaaaaaaaccgttc caaccacccacctggctacagatccacgacaacgtatctacacgttccctcctagacaca gcgttaatacattgcacggacgcagccgagctctaccttcagggcggttgtaccggcttc gcgggggagatggcagcactggcgcagcagatagccctgcagatatcactgttgaatgcc tcgcctacgagactgatattaaataggagtacagagcaaatgtatagacttgtcagtgaa tatctgagtttcatggaaggcctagtcctgctagcgggtcgcggcggcgaggcgtggcgc gagctgtcctaccgccgcacgctcaccaacgaccaggcctacctgcgcgacatggctatg tatagacctgatgtagcacatgacttcctaaatagatacaagacggaacgcaacaaaaca acagtgtcacaggcggccatgacagagttacgcaacctctgtagatga

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