Trichoplusia ni (cabbage looper): 113506023
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Entry
113506023 CDS
T05757
Name
(RefSeq) pre-rRNA processing protein FTSJ3-like
KO
K14857
AdoMet-dependent rRNA methyltransferase SPB1 [EC:2.1.1.-]
Organism
tnl
Trichoplusia ni (cabbage looper)
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tnl03009
]
113506023
Ribosome biogenesis [BR:
tnl03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
113506023
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Spb1_C
FtsJ
DUF3381
LLPH
ANIS5_cation-bd
Motif
Other DBs
NCBI-GeneID:
113506023
NCBI-ProteinID:
XP_026744690
UniProt:
A0A7E5WV27
LinkDB
All DBs
Position
2:complement(7941967..7946821)
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AA seq
848 aa
AA seq
DB search
MGKKTKVGKQRKDKYYQLAKETGYRSRAAFKLIQLNRKFGFLQKSRVCIDLCAAPGGWMQ
VAHQNMPLSSVVIGVDLFPIKPVPGCIGLTEDITTEKCKTAIKKEIKTWKADVVLNDGAP
NVGLNWIHDAYQQACLTLSALKLATHFLREGGWFVTKVFRSKDYHALLWVLKQFFKKVHA
TKPQASRNESSEIFVVCQGYIAPDTIDPKFLDPKSVFEDLDIVKKQHLNIMHPEKQKKAK
AEGYLENDYTTHHKVLLSQFLKPDQDPIDLLQGCSEIVIDDKSILENPKTTEEIKECCKD
IKVLGRKDLKALLTWFKQMKELKASQEEKTEEKEDGNEETKEDADDEKDGEDDVDAEIAG
LQDEERRQSKRKRKQLNKQRQKLAEKMNLKMVLKGDGGPILESNDMFQLSDIKNAEELAR
MVDQQPDIVAEQSEDSDDEFKVKQKYMKYDTESSKLDSSGAYYKDSDSELEMESDSDNEQ
DKETLAFSDSDTENKKIAKLTKLNTLQNAKVPKSKAIPKNHPLLTDLDNTDSVSRRSLKA
DLWFQKDSFKDIDEDDDEGVDLDKLAETYVEKGKKVAEEGKPANLKNGLKRKLDEESSDD
DSSDSDYDVENNVAPSTGKAGAKSNKKDGFEVVPEDPELKRLKKTLKMDAETLALGTMIA
TSKKFKRDLIDDGWNRYAFNDKNLPDWFVEDEKKHMKKEIIVPEKYTEEYKTKLQDINAR
PIKKVIEAKARKKKRTIKKMERAKKKVEAVMENADMSEREKAQQIKHLYKKAQTDGKKKV
TYVVAKKHTSAKRMKRPQGVKGHYKVVDSRMKKDLRAQKAKEKTKGRGKKGKPKTHKPPP
KKKGKKAK
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atggggaaaaaaactaaagtaggaaaacagcgaaaagataaatattatcaactagcgaaa
gaaacaggttataggtctcgagccgcattcaaattaattcaattaaaccgtaaatttggg
tttcttcaaaagtctcgagtatgtatcgacttatgtgctgcgcctggtgggtggatgcag
gtagcgcaccagaacatgccactttccagtgtggtcatcggtgtcgacttgtttccaatc
aaaccagttccaggctgtatcgggctcactgaggacattaccacagaaaaatgtaaaaca
gccataaaaaaagaaataaaaacatggaaggctgacgtcgtgctaaacgatggtgctcca
aatgttggtcttaactggattcatgacgcgtatcagcaagcttgtcttacacttagtgcc
ctgaaattagccacacatttcttaagagaagggggatggtttgtgaccaaagtttttagg
tcaaaagactaccatgcattgctgtgggtgttaaaacagtttttcaagaaagttcatgca
acaaagccgcaggcgtcccgtaatgagtcatctgaaatatttgtggtgtgtcagggctat
attgctcctgataccattgatccaaagtttcttgatcccaagagtgtgtttgaagatttg
gatattgtgaagaagcagcatttgaatattatgcatcctgagaaacaaaagaaggctaag
gccgaagggtatctggaaaatgattacaccactcaccataaagttttactttcacaattc
ttgaaaccagatcaggatcctatagatttactgcaaggatgctctgagattgttatagat
gataaatctattttagaaaatcctaagaccactgaggaaattaaggagtgctgtaaagat
atcaaagttcttggtagaaaggatctgaaagctttgctcacctggttcaagcaaatgaag
gagttgaaggcttcacaggaagagaaaacagaagaaaaagaagatggcaatgaagaaaca
aaggaagatgcagatgatgagaaagatggagaagatgatgttgatgctgagattgctgga
ttacaggatgaagaaagacgccaatcaaaacgcaagagaaaacaacttaataaacagaga
caaaagctagcagagaaaatgaatctgaaaatggtactcaaaggagatggtgggcctatt
cttgagagcaatgatatgttccagctatctgacattaaaaatgctgaggaactggcgcgc
atggtagaccagcaacctgacatagttgcagaacaaagtgaagattcagatgacgaattc
aaagtaaaacagaaatacatgaaatatgacacagagtcatctaaactggattcatcagga
gcatattacaaggactcagacagcgaactggaaatggaatcggattctgataatgaacaa
gataaggagacactagcattttctgattcggatactgaaaataagaaaatcgccaaactt
acaaaactcaacactctgcaaaatgctaaggttcctaaatctaaggctattcccaagaat
cacccacttttgactgacttggataatactgactcagtctccagacgctctttgaaagca
gatctatggttccagaaagatagtttcaaagatattgatgaagatgatgacgaaggcgta
gatttagataaattagcagaaacttatgtagagaaaggtaaaaaagttgctgaggaaggc
aaaccagctaacttgaaaaatggattgaaaaggaaactggatgaagagagctctgatgat
gattcttcggacagtgattacgacgtcgagaacaatgtagctcccagcaccggaaaagct
ggcgctaagtccaacaagaaagatgggtttgaagtagttccagaagaccctgagttaaaa
aggctgaagaaaactctcaaaatggacgcggagacacttgcattagggacaatgatagct
acttcaaagaagttcaaaagggacttgattgacgatggctggaatcgttatgcctttaat
gacaaaaatttgccagactggtttgtggaagatgagaaaaagcacatgaaaaaggaaatc
attgtaccagagaaatacacagaagaatataaaaccaaactacaagacatcaatgctagg
ccgataaagaaagtgatagaagctaaagcaagaaagaagaagcgtactattaaaaaaatg
gagcgtgccaagaagaaggttgaggctgttatggaaaacgctgacatgtcagagagagag
aaagcgcaacaaatcaaacatttgtacaagaaggcgcagacagatggaaaaaagaaagtc
acttatgtagttgccaagaaacatacaagtgctaagaggatgaagagacctcaaggagtt
aagggtcattacaaagtggtcgattctcgtatgaagaaagatttgcgcgcacaaaaagcc
aaggaaaagacaaaagggcgaggcaagaaaggaaaaccgaagacccacaaacctcctccc
aaaaagaaaggaaagaaggctaaataa
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