Trichoplusia ni (cabbage looper): 113506064
Help
Entry
113506064 CDS
T05757
Name
(RefSeq) sphingomyelin phosphodiesterase 4 isoform X1
KO
K12353
sphingomyelin phosphodiesterase 4 [EC:
3.1.4.12
]
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl00600
Sphingolipid metabolism
tnl01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
113506064
Enzymes [BR:
tnl01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.12 sphingomyelin phosphodiesterase
113506064
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
mit_SMPDase
Gtr1_RagA
Motif
Other DBs
NCBI-GeneID:
113506064
NCBI-ProteinID:
XP_026744725
UniProt:
A0A7E5WV62
LinkDB
All DBs
Position
2:7957620..7962699
Genome browser
AA seq
777 aa
AA seq
DB search
MAHDIMAISLQSQFYTSLNLPLQEKLMELTRIIDQSTPSKDLQALFPQLISNIFSSSFNN
GWGLRTVTVDTNKYAFEGLISFFEPMGPMFRLCYKLLSEPQLKYNLPLTDLPIDLQMTLE
RGRCPQFYSDMLVTDSQSLNVVALALNPFDYYIFNFALHLVSNSQQKSSWENWSSVYFAL
ACDYLMHFLPADPNVSVMPHIPNYTGKVPMAAPLQTANRPLYSPSLLLIPDLSGSSMANQ
HSTQNQSRNEVWRSETVLQVFIDIWMSVEQFSARNVESFQRNYTLVSSSPERVRTVRVLV
KHLHSFSAKHMSDPAVRSSALRKYARQIMCVRAYHYIKHLVATWPLDASFRLVMELWLSL
IQPWRYVNNTISQDRFPIANNNQEEGGPTNTLDASFTQFIAENFPSYTCIFQLVLPRFMR
LDLTAYKNAVMLFRLGKVFSQQHLGPILWNLEQAILDCGSGLNLSPDTSYNNSGIEQSYT
YNGVSLHKWVTIAKQAISEFNLSANFEYEPIWSDSMRMFASELVKKIISAKQTAENNVQE
FNRRLRLRNQGLWSAIKIFLMIENEHEEVALLEESKKVPNYLSISIHHFSTIFGLNENTL
LPPEPIIEDNSLEHSSFVNSTSFPLSITNKLRSKTTKIHYMGDPDLMPITTYESTILVRM
LYQIATRLNEVYGYQFNSLWNRSDLLGFVTREILQSPCVIQTYVKDVTNHQNIVTQELPA
RLSLRRLGSHAFVVWLTLGYIMFKLFSYSGFFYIFVLAVLWLSYVFTKASFKMLRLI
NT seq
2334 nt
NT seq
+upstream
nt +downstream
nt
atggcacacgatatcatggctatttcattacagagtcagttttacacaagcctcaactta
ccgctccaggagaaactcatggaattaacaagaataatagatcagtcaactccaagtaaa
gatttgcaagctttatttccacaattaataagcaatatattctcgtcatcttttaacaat
ggctggggattaagaacagtaactgttgatactaacaagtatgcatttgaaggtttaata
agcttctttgaacccatggggcccatgtttaggttgtgctacaaactactatcggaaccc
caattgaaatacaacttgcctttaacagatttacctatagacctgcagatgaccctggaa
agaggtagatgtccacagttctactcggacatgcttgtcactgactcacagtcactcaat
gtagttgctttggcactgaatccatttgactactacatcttcaactttgccttgcacctt
gttagcaacagtcaacagaagagttcttgggagaactggagcagtgtgtactttgcccta
gcatgtgattacctcatgcactttctgccagccgaccccaatgtgtctgtcatgccgcac
atacccaactatactgggaaagtgcccatggctgctcctctacaaacagctaataggcca
ctgtactctccatctctgcttctaatacctgatctgtcaggttccagcatggctaatcag
cactcaactcagaaccagtcaaggaatgaagtgtggagatccgaaacagttttgcaagtc
ttcatagatatatggatgagtgttgagcaatttagtgctcggaatgttgaatcttttcaa
cgaaattacactctcgtctcttcgagcccggagcgcgtgagaacagtgcgagtacttgtg
aaacatttgcactcgttttctgcaaaacatatgtcggatccggcggttcgatcatcagcg
ctcagaaaatatgcgcgccagataatgtgtgttcgtgcgtaccattacattaaacatttg
gttgcaacatggccgctggacgcgtcttttaggcttgttatggaactgtggcttagtctt
atacaaccttggagatatgtcaataatactatatctcaagatcgttttccgattgcaaac
aataatcaagaggaaggtggccccaccaatactttagatgctagtttcactcaattcatt
gcagaaaattttccgtcttacacatgcatctttcaactagttctaccacgatttatgaga
ctggacttaactgcttataaaaatgccgtaatgctgttcagattaggcaaagtattttca
caacaacatctaggtccaatattatggaatctggaacaagcaattttggactgtggctct
gggttaaaccttagtccagataccagttacaataattctggaattgaacaaagctatacg
tacaacggcgtgtcgttacataaatgggtaactattgcaaaacaagctatatccgaattc
aatttatctgccaacttcgagtatgaacctatttggagcgacagcatgcggatgtttgcg
tcggagttggtaaaaaagattatctctgcaaagcaaactgcagaaaacaatgtacaagag
ttcaacaggaggttgcggctccgtaatcaaggtctttggtctgccataaaaatatttttg
atgattgaaaatgaacatgaagaagtagctttactagaagaatctaaaaaagttcctaat
tatttatcaataagtattcatcatttttctacaatatttgggttgaatgaaaacaccctt
ctgccaccagagccgattattgaagataattccttggaacattcgtcttttgtcaactca
acaagttttcctctttctatcaccaataagttgcgcagcaaaactaccaaaatacactac
atgggtgatccagatttaatgccaattacgacttatgagagcacaatattagtgagaatg
ttgtaccagatagctacaagactcaatgaagtatatgggtatcagttcaacagcctttgg
aatcgatccgacttgttaggattcgtgactcgcgagattctacaaagcccctgcgtgatc
cagacttacgtaaaagatgtgaccaatcatcagaatatcgtgactcaagaacttcccgct
cgactgtcgctgcggcgtctcggatcccatgcctttgttgtatggctcaccttaggctac
atcatgttcaagttattttcctacagcggatttttttatatatttgtcttagctgtattg
tggctgtcgtacgtcttcacaaaggctagttttaaaatgttaagattaatttaa
DBGET
integrated database retrieval system
