Trichoplusia ni (cabbage looper): 113506652
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Entry
113506652 CDS
T05757
Name
(RefSeq) chondroitin sulfate proteoglycan 4 isoform X1
KO
K08115
chondroitin sulfate proteoglycan 4
Organism
tnl
Trichoplusia ni (cabbage looper)
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
tnl00535
]
113506652
04091 Lectins [BR:
tnl04091
]
113506652
Proteoglycans [BR:
tnl00535
]
Cell surface proteoglycans
Others
113506652
Lectins [BR:
tnl04091
]
C-Type lectins
Others
113506652
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin_3
Laminin_G_1
Laminin_G_2
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
113506652
NCBI-ProteinID:
XP_026745280
UniProt:
A0A7E5WWQ7
LinkDB
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Position
21
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AA seq
2098 aa
AA seq
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MARGQIVHSVTVNDGLWHKMHLSFYPSMIELTVDNIAMHTRIESGGTRYLDLSDSFYLGG
IESEKQQRAFTKGIKAADSSIMGCIKPIEVDEKLYGLPNAVVTYGVSPKCVWWYPCHASP
GNPPCGPRAACHQHGVDHFTCKCDTDLCINPDYAEKYKVFSKSSSELELVALFPLTVQEG
GVSVITTQNIDVVLDHHKYGVRPSGVVLHVAQSPQHGRIAVDLSLQRNSQQYNFIEGESK
SKQFFTLLDLSRDKVRYVHDGSENHQDAIVLDMELIPETKFTLPSYLQGRNTFVLHVNVT
PVNDPPVLNLLPGKVLRLTQGTRKAITSDILKAEDPDTAPEDLLYTVLHGKNEANSGHIE
MSGQPVDSFTQQDIDSGVISYVHGTNNEKQLNKTSLRLTLQVSDGIETSGPGILRISIVP
LQVRLVNNTGLQLVHNSYVIITADNLTFTTNADETNVPVKYDIVKPPQFGVVERLRVLDG
TWQTVDSFTSEMVTFGRVRYMHLLGNPSHDEFKFKASVGTIRTNTLYDFRLTFIKLELYQ
SVNEELVLNNTREAFISSQHLKFKTNPLALPSDRVIYTILRPPKYGILHLSSGKHHLQMH
NTFTQQNIDTDQLWYRLHRRAYSHIQDEFTFVVGATECENITGVMTIRHTPGTITSDRSE
GRVHTTLERLQVTEGSRMVIPATHLNFRTDAVTNLIFNITHLPRHGKIEVINDILKIMRD
NTTYFTLEELNSDRVYYAHDDSESRHDSFHFMALSPEPEDFQYVGVFHIDIILKNDNSPV
RANDNVFHIVHGGARLITARDLSYTDADLDTKPSDIIYTVQRYIKDPPNGGIFRADNPSE
QIAQFSQDDINKNLVLFKHQGKEYGKMAFWISDGLFDVNGNLEIQASPPFIRMYSTNGSI
VENGKAVVITARDMQVDTNMNCLEEDIRYEVTLEPKHGTIEVGEGQGAYTFTQLDVAAGR
VSYRHREPKTPTDQFRFKVMCLDTWGEGVYMIKIFPSSYWEPLRVTTNRPLIVEESTSVN
VTRDILEVMHPQIEPSNIVYQVTDGPYHGWLEITTTPGTLELENYNEEPVHIKVFDQSII
NANRLVYVQSGVNRTRDRIRMDVTNGIVWLRDVELNVVIIPEHFYVAASNLTVVEGEAVS
VKPDLFRTVTEFYRGKVVAYKVVEKPKFGKIVMADQELNLLPVLKLNSGNIQYANDGSEE
SSDLFRLVAMTENSKESEPFAVHINIVPVNDEPPIVAANTGLCVWEGGTFTFTTKELYVN
DIDTPPENVTVRVVDIVSGYIAMRGSLDTAVHRFTQQDIDNGKVVFVHKNGTKGKMIFNV
TDGLHELSKITFLITTKSVSLKLSRKQNLRVFPLMREPLNNYFLMSKCSDPTRTIIYKVD
RAPTLGRLIMLNGESHHRSIKQFTQQDVNNSAVFYEHTHPFSDLYTNDSFIFTVEAPLAK
PLTDQIFNIDISVSSGGLAKYVNIPQIKVQEGDKVPIKVNVSNVITYLETQAGLRQPQIE
AQWSQPSHGELKPFMSSLTQSQIESGVVNYEHDDSDTLQDKIDMSLYLLPDYVLLCNVTI
PIHIIPVNDQPFRLLTDSPQIQVVQGENYTITKNDLLTEDADTGPTGILYDIISGPTQGR
MVMLDKNHTVYEAHSINKFTQDDINNGRVIYEHSGILQTATFYFRVWDGQFKPTYTVFTI
DVLPVILNATSLHPIYLQQGSNVAAVTTEQIYVETNAKTSKVLYNITRQPLHGMIYIGRN
PVSYFTHRDLMEKVVIYMQNDMTTANDSFDLIAYVHNSNATRPFTIEVIVQPLMALGDLR
VEIEKAKITLSTMDATGLAKLTASDPVYTLLRKPRFGMIKKIIRSSGEKTSAREREVAYF
THEDVKAGVIYFVTKKKVSELNGFEDSFRFLLAATIFQPAVGDVKIYIGNRQKKNLPGPN
DPESHEGVPVANGEAASYYMMILMALSGTVLAIIVIFGLLKCRRYLMRDQNALVKIHGQS
QGAVAPIPLPRPPDHLMPSPSQGTPPIKRYVSSEQSVQTGASTPLPSGGSVACKVTPLAD
AALPDLNARYPYGTDDHTDYGSLQAEDWSSYEASESAFPVRGGGAPANPMLRRNQYWV
NT seq
6297 nt
NT seq
+upstream
nt +downstream
nt
atggctcgcggacagatcgtgcattccgtcacagtcaatgacggcctctggcacaagatg
catctgtcattctacccctccatgatagagctgactgtggacaacatagccatgcacacg
cgcatcgagagcggcggcacgcgctacctcgacctgtccgactccttctatctcggcggc
attgagagcgagaagcagcagagagccttcacgaaagggattaaggcagccgattctagt
attatgggatgcattaaaccgatagaagttgacgaaaagctgtacggtctcccgaacgcg
gtggtgacgtacggcgtgagtccgaagtgcgtgtggtggtacccgtgccacgcgagcccc
ggcaacccgccgtgcgggccgcgcgccgcctgccaccagcacggcgtcgaccacttcacc
tgcaagtgcgacaccgacctctgcatcaatcccgactacgccgaaaagtacaaggtgttt
tcaaaatcgagtagcgaactggaactagtagcattgttcccactgacggttcaagagggc
ggagtatcagtgattacaacgcagaacatcgacgtggtcctcgaccaccacaagtacggc
gtgcgcccgtcaggggttgtgttacatgtcgcgcagtcgccgcaacacggacggattgcg
gttgacttatcgctgcagagaaactcgcaacagtacaacttcatagaaggggagagcaag
tccaaacagttttttacactgcttgacttgtcaagagataaggtccgttacgtgcacgac
ggctccgagaaccatcaggacgcgatcgtcttagacatggaactgatccccgagacgaag
ttcacactgccgagctacctgcaaggacggaacacgtttgtgttgcacgtgaacgtgacg
ccggtcaacgacccgcccgtcttgaatctcttgccgggaaaggttctgagacttactcag
ggcacgcgcaaggcaatcacttcagatatactgaaggcggaggaccccgacacggcgccc
gaggacctgctctacaccgtgctacacgggaagaatgaagctaacagcggtcacatagag
atgtcgggccagccggtggactcgttcacacaacaagacatcgactccggcgtcatatcg
tacgtgcacggaacgaacaacgagaagcaactcaacaagacctccctcagattgacacta
caagtatctgacggcatcgagaccagtggtccgggcatcctgcgtatatccatagtgccg
ctgcaagtgcgcctggtgaacaacaccggcttgcagctcgtacacaactcgtacgtcatc
atcaccgctgataacctcaccttcactaccaacgctgatgagaccaacgtgcctgtcaag
tatgacatagtaaaaccaccccagttcggtgtggtggagcgactgcgagtgttggacggc
acgtggcagaccgtggactccttcacaagtgaaatggtgacgttcggccgagtcagatac
atgcacttactggggaacccatcgcatgacgagtttaagttcaaagcttcagttggcaca
atacgaacgaataccctttacgattttcgacttacattcataaaactcgaactttaccaa
tcagtgaatgaagaacttgtattaaacaacacaagagaggctttcatatcgtctcagcat
ctcaagttcaagactaatcctctcgcattgccaagtgatcgcgtgatctacacgatactg
aggccacccaagtacggcatactgcatctgtcgtcaggaaaacatcatctgcaaatgcac
aacacattcacacaacagaacattgacactgatcaactatggtatcgattacacagaaga
gcttactctcatatacaagatgagtttacatttgtcgtgggggctacggagtgcgaaaac
ataacgggtgttatgactatacgacatactcctggtactataacatcagaccggtctgaa
ggacgtgtgcacaccaccttggagcgactacaagtcacagaaggatccaggatggtcatc
cccgcaactcacttaaacttccgaacggatgctgttactaatctcatttttaacatcact
cacttacccagacacggcaaaatcgaagtgatcaacgatatcctcaaaattatgagagat
aatacgacctattttacattagaagaactgaattctgatcgagtatattacgctcacgat
gattccgaaagcagacatgattcgttccacttcatggctttgagtcccgagcctgaggat
ttccaatacgtcggcgtgtttcacatcgatattatattgaagaacgacaacagccctgtg
agagcaaacgataacgtgtttcacattgtccacggcggggcgagactgataactgctcgg
gacctgagctataccgatgcagatttagatacgaaaccatctgatataatctacactgtt
cagcgatacatcaaagatcctccgaacggtggaatttttagagctgacaatccctcagag
caaatagcgcaattctctcaagatgatatcaataaaaacttagtgttgttcaagcatcag
ggtaaagagtatggcaagatggctttctggatttcggatggattgttcgatgtaaacggc
aacctggagatacaggcttccccgcccttcataagaatgtattcgactaacgggtccatc
gtggagaatgggaaagcagttgtaattactgccagagacatgcaggttgacacgaacatg
aactgccttgaagaagacatccgttatgaagtaacactggaaccgaaacacggtactata
gaagtcggcgagggacagggagcatacaccttcactcagctggacgtagccgcgggcaga
gtgtcgtacagacatcgggaaccgaagacacccactgatcaattcaggttcaaagtgatg
tgtctggacacttggggcgagggtgtgtacatgatcaagatattcccctccagctactgg
gaaccgctccgcgtgaccactaataggcctctcattgtggaagaatcgaccagtgttaat
gtcaccagggacatattagaggtgatgcatcctcaaatcgaaccatcaaatatcgtgtac
caagtaacagacgggccctaccacggctggttagaaataaccacaacaccgggcactctc
gagctggagaactacaacgaagaaccagttcacatcaaggtcttcgaccagtccatcatc
aacgctaaccgactagtttacgtccagtccggcgtcaacaggacacgagacaggattcga
atggacgtcaccaacggaatcgtgtggcttcgagacgtagagctgaacgtagttataatc
ccggaacatttttacgtggcggcatcgaacttgaccgtcgttgaaggcgaggcggtgagc
gtcaaaccagatttgttcagaaccgtcacggagttctacagagggaaagtcgtggcttac
aaagtagtcgagaaacctaagtttggaaagattgtgatggccgatcaggagctcaatctc
ttacctgtattgaaactcaattctggaaacattcagtatgctaacgacgggtcagaggaa
tcatcagacttgttcagactagtagccatgacggagaacagcaaggagagcgagccgttc
gccgtccacataaacatagtgccggtgaacgacgagccgccgatagtggccgccaacacg
gggctctgcgtctgggagggagggaccttcaccttcaccaccaaagagctttatgtgaac
gacatcgacacgcctcccgaaaacgtgaccgtccgcgtggtggacatcgtgtccggatac
atcgccatgcgcggcagcctcgacaccgccgtgcatcggtttactcagcaagacatcgac
aacgggaaagttgtgttcgtgcacaaaaatggcacaaaaggcaaaatgattttcaacgtc
accgatggactgcacgaattgtcgaaaatcaccttccttataaccaccaaatccgtctca
ttgaaactatcaagaaaacaaaacttgcgcgtgtttccgctcatgagagaacctttgaac
aattacttcctcatgtccaagtgctctgaccctacgaggactatcatttataaagtggat
agagcgccaactctcggcagacttataatgttaaacggagaaagccaccatcgatcaata
aaacagtttacacaacaagatgtcaacaattcagcggtgttttatgagcatactcaccca
ttctctgatttatacacaaacgactcgttcatattcacagtggaagctccgctagccaaa
ccactgacggaccaaatattcaacatagatatatccgtgtcctctggtggtcttgccaag
tacgtcaacataccccaaattaaagtacaagaaggtgataaagtgcccattaaggtgaat
gtgagtaacgtcatcacgtatttagagactcaggcaggattgaggcaacctcagatagaa
gcgcagtggtctcagccgtctcatggtgaactgaaaccattcatgtcatcgctgacgcag
tctcaaatagaaagcggagtcgtcaactacgagcacgacgattccgacacccttcaggat
aaaatcgacatgtcgctgtatttactaccagactacgtcctgctgtgcaacgttacaata
cctatccatataattccggtcaacgatcagcccttcagattgctcacagacagtccacaa
attcaagttgtacaaggcgagaattacaccatcactaaaaatgatctgttaactgaggat
gccgacacgggcccaaccggcatcctgtacgatatcatcagtggcccaacgcaagggcgg
atggtaatgcttgacaaaaatcacactgtctatgaagcacattcgattaacaagttcacg
caagacgacattaacaacggcagagttatttacgaacattctggaattctacaaactgct
actttctatttccgggtttgggatggacagttcaaaccgacgtatacagttttcacaata
gacgtgttgccggtcattctaaatgctacgtctttgcatcctatatacctacaacagggc
tcaaatgtagcagcagtaaccacggaacaaatatacgtagagacaaacgcaaagacatct
aaagttctatacaatatcactcgtcagcccctccacggtatgatatacatagggcgaaat
ccggtgtcatacttcactcatagagatttgatggagaaagttgtgatatacatgcaaaat
gacatgacgactgccaacgacagctttgatctaatagcgtacgtgcacaacagcaacgca
acccgtccattcaccattgaggttatagttcaacctttgatggcactcggagatctgcgg
gtcgaaatcgaaaaagccaagataacactgagcaccatggatgcaaccggactcgccaaa
ctgacagccagtgatcctgtgtacacgctgttgaggaagccaaggtttggtatgataaag
aagattattagaagttctggtgagaaaacaagcgccagagaaagagaggtggcgtacttc
actcacgaggacgtgaaagccggggtcatatactttgtgaccaagaagaaagtgagtgag
ctgaatggatttgaggacagcttcaggttcctgctggccgccacgatctttcagccggct
gttggcgacgtcaagatctacataggcaacagacagaagaagaatcttcccggaccgaat
gacccagagagccatgagggtgttccggtggctaacggcgaagcggcgtcctactatatg
atgatcctgatggctctatcgggcaccgttcttgccatcatcgtgatattcgggctgctg
aagtgtcggcggtacctgatgcgggaccagaacgcgctggtgaagatccacggccagagc
cagggtgccgtggctcccataccgctgccgagaccgcccgaccatctcatgccctcgccc
tcacagggcacgccgcctattaaacgctacgtatcgtcggagcagtcagtgcagaccggc
gcgagcacgccgctgccgtcgggcggcagtgtggcctgcaaggtgacgccgctcgccgac
gccgcgctgcccgacctcaacgccaggtacccctacgggaccgacgatcatactgactac
gggtcgttgcaggcggaggactggagcagctacgaggcgagcgagtccgcgttcccggtg
cggggcggcggcgcgcccgccaaccccatgctgcgccgcaaccagtactgggtctga
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integrated database retrieval system
