KEGG   Trichoplusia ni (cabbage looper): 113506978
Entry
113506978         CDS       T05757                                 
Name
(RefSeq) splicing factor 3B subunit 1-like
  KO
K12828  splicing factor 3B subunit 1
Organism
tnl  Trichoplusia ni (cabbage looper)
Pathway
tnl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tnl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    113506978
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tnl03041]
    113506978
   03036 Chromosome and associated proteins [BR:tnl03036]
    113506978
Spliceosome [BR:tnl03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    113506978
 Complex B
    113506978
 Complex C
   U2 SnRNP specific factors
    113506978
Chromosome and associated proteins [BR:tnl03036]
 Eukaryotic type
  Chromatin remodeling factors
   B-WICH complex
    113506978
SSDB
Motif
Pfam: SF3b1 PPP2R1A-like_HEAT TOR1L1_N HEAT_EZ HEAT_EF3_N HEAT_ECM29 Htt_N-HEAT_1 HEAT_2 XMAP215_CLASP_TOG UTP20_N
Other DBs
NCBI-GeneID: 113506978
NCBI-ProteinID: XP_026745629
UniProt: A0A7E5WYS2
LinkDB
Position
Unknown
AA seq 1338 aa
MDKIPRTHEAIEAQIREIQSKKNELPENGANKGVSLGETYYDSDIYDNAGTGGKSRYDGY
VTSIAANDEVEDDDVENVPITQKRSSGYTAPASLLNDIAQTDKDYDPFADKRRPTIADRE
DEYRQKRRRMIISPERTDPFAEGGKTPDVGSRTYTEIMKEQYLRAEETELRKKLLERARE
GTLKPVAQSNGETTKPAAKRKGRWDQSSEDTPVAKKTVSATPTSQTTPSWDQERGAWEET
PSAPGRGGETPGATPSARVWDATPGHITPGHATPGRDTPAQHASRRNRWDETPKTDRETP
GHNSGWAETPRTDRGTGVDTIQETPTPGTKRRSRWDETPGATPAAATPTPSHATPSHATP
SHATPSHATPTPHTPMFTPGGSTPVGIKAMAMATPTPGHVAAMTPEQLQAYRWEKEIDER
NRPYTDEELDAMFPPGYKVLPPPAGYVPIRTPARKLTATPTPLGGTPIGFFMQTEELGGS
AAAAARLLDPQPKGSQQLPFMKPEDAQYFDKLLIDVDEDALSPEELKERKIMKLLLKIKN
GTPPMCKAALRQITDKAREFGAGPLFNQILPLLMSPTLEDQERHLLVKVIDRILYKLDDL
VRPYVHKILVVIEPLLIDEDYYARVEGREIISNLAKAAGLATMISTMRPDIDNIDEYVRN
TTARAFAVVASALGIPSLLPFLKAVCRSKKSWQARHTGIKIVQQIAILMGCAILPHLKSL
VEIIEHGLVDEQQKVRTITALASAALAEAATPYGIESFDSVLKPLWKGIRTHRGKGLAAF
LKAIGYLIPLMDAEYANYYTREVMLILIREFQSPDEEMKKIVLKVVKQCCGTDGVEPQYI
MDEILPHFFKHFWNHRMALDRRNYRQLVDTTVEIANKVGASEIINRIVDDLKDDNEQYRK
MVMESIEKILANLGAADIDSKLEEALIDGILYAFQEQTTEDVVMLNGFGTIVNQLGKRVK
PYLPQICGIILWRMNNKSAKVRQQAADLISRIAVVMKTCQEEKLMGHLGVVLYEYLGEEY
PEVLGSILGALKAIVNVIGMTKMTPPIKDLLPRLTPILKNRHEKVQENCIDLVGRIADRG
PEFVSAREWMRICFELLELLKAHKKAIRRATVNTFGYIAKAIGPHDVLATLLNNLKVQER
QNRVCTTVAIAIVAETCSPFTVLPALMNEYRVPELNVQNGVLKSLSFLFEYIGEMGKDYI
YAVCPLLEDALMDRDLVHRQTACAAIKHMALGVYGFGCEDALVHLLNHVWPNIFETSPHL
VQAFMDAVEGMRVALGPVKILQYALQGLFHPARKVRDVYWKIYNTLYIGGQDALVAGYPR
IQNDPNNHYLRYELDYLL
NT seq 4017 nt   +upstreamnt  +downstreamnt
atggataaaattcctagaactcacgaagctattgaagctcagattagagaaatccaatca
aagaagaatgaactgccagaaaatggtgcaaataagggagtctctctgggtgagacgtac
tatgatagtgacatctatgacaacgcgggaacgggtgggaagtccagatatgatggttat
gtgacatctattgcggctaatgatgaagtagaagatgatgatgttgaaaatgtaccaatc
actcagaagagatctagtggatacaccgctcctgcttctctgttaaatgatattgctcag
actgataaagattatgacccttttgctgacaaaagaaggcctaccatcgctgatagagaa
gatgagtatcgtcaaaaaaggcgaaggatgattatatccccagagagaactgacccattt
gctgaaggtggaaaaactcctgatgtagggtccaggacatatacagagattatgaaagag
caatacttgcgggcggaagaaactgagttacgaaaaaagttgttggagagagctagagaa
gggaccttgaaaccagtagcccagtctaatggcgaaacaacaaaaccggctgctaagcgc
aagggacgatgggatcagagttctgaagacacaccagtggctaagaagactgtttctgct
acaccaacttctcaaacaactccgtcatgggatcaagagagaggtgcttgggaagaaacc
ccaagtgcacctggccgtggtggcgaaacccccggcgcgacgccctcagcccgagtgtgg
gacgccactccaggacatattacacctggtcatgctacacctggcagagatactcccgcg
cagcacgcctctagacgtaaccggtgggatgagacccctaaaaccgatcgagagactcct
ggacataacagcggctgggctgaaactcctaggacagaccgcggcaccggtgtggacact
attcaggagacgccaacaccaggcactaagcgccgctcgcgctgggacgagaccccgggc
gctacgccggccgccgccacgcccacgccttcgcacgctacgccgtctcatgctacaccg
tcacacgctacgccctcgcatgctacgcctactccacatactccgatgtttactccggga
ggatctacaccagtgggaataaaagcgatggctatggctactccaactcccgggcacgtc
gccgcaatgacaccagaacagctgcaggcctatcgttgggagaaagaaatagacgagcgt
aacagaccctacactgatgaggagttagatgccatgttcccacctgggtacaaggtttta
ccgccccctgccggttatgttccgattcggaccccagcccgaaagctgaccgcaactcct
actccactgggtggtacccctatcggctttttcatgcagacggaggaactgggagggtcg
gccgcggcggctgcgcgcctgctcgacccgcagcccaagggtagccagcaactgcccttc
atgaaaccagaagatgcacagtactttgataaactgctcattgacgtcgacgaggacgct
ctctccccggaagaactaaaagagaggaaaatcatgaaattgctcctgaaaataaaaaac
ggtacaccaccaatgtgcaaagctgcacttcgtcaaataacggacaaggctcgtgagttt
ggcgcaggaccattatttaatcaaattcttccgctacttatgagccctactctggaggac
caggaaagacatttactcgtcaaagttattgacaggattctgtataagttagatgatctt
gtccgtccttatgtacataagattttagtggttattgaacctttgctgatcgacgaagat
tactacgcgcgtgttgaaggtcgagaaattatatcaaatttggctaaggctgctggtctc
gcgactatgatctccacaatgagacctgatattgacaacatagacgagtatgtccgtaac
acaactgctagagcttttgctgttgtcgcgtctgctttaggtattccatcactgctacca
ttcttaaaggccgtgtgcaggtcgaaaaaatcctggcaagctagacacactggtataaaa
attgtgcagcaaatcgctatcctcatgggctgtgctatactaccgcatttgaagtcttta
gtagaaattattgaacatggcttagttgacgaacaacagaaagttcgtaccatcacggct
ttggcaagtgctgctcttgcggaagctgctacgccgtacggtatcgagtcgttcgactcc
gtgctcaaacctctctggaagggtatcaggacccacagaggaaagggtctggccgccttt
cttaaggccattggttatctcatcccacttatggatgctgaatatgccaactactatact
cgtgaagtgatgcttatcctaattcgtgagttccagtctcctgatgaggaaatgaagaag
attgtattgaaggtagtgaaacagtgttgcggtacagatggtgtggaaccccagtacatt
atggatgagattctaccacacttctttaaacatttctggaaccatcgcatggctcttgat
cgccgtaattatcgccaactcgtagataccacagtagaaattgctaataaagttggagct
tcagaaatcattaacaggattgtagatgatctcaaagatgataatgagcagtacagaaag
atggtaatggaatctattgaaaagattctagctaatttaggagcagcagacatcgattcg
aaactcgaggaagctcttattgacggtatactgtacgcattccaagaacagacaactgag
gatgttgtaatgttaaacggattcggcacgatcgtgaaccagctagggaaacgtgtgaaa
ccgtatctgccacagatctgcggtatcattttatggcgcatgaacaataagtctgcgaag
gtccgtcaacaagccgccgaccttatttcacgtattgctgttgttatgaagacgtgtcag
gaggaaaaactcatgggccatcttggcgtcgtactttacgaatatcttggtgaagaatat
ccagaagtacttggttctatactcggggcattgaaagctattgtgaatgtcattggtatg
acgaaaatgactccacccattaaagatctcttgccaagacttacacctattcttaagaac
agacacgaaaaagtacaagagaattgtattgatttagttggacgtattgctgacagagga
ccggagttcgtctcagcaagggagtggatgagaatatgtttcgaattgcttgagttgtta
aaggcacataagaaagcaatcagaagagcgactgtaaacacgtttggttacatcgctaaa
gcgattggacctcatgacgtattggcgactttgctcaacaacttgaaagtacaggagaga
cagaatcgagtttgtacaacagtggccatcgctatagtagctgagacttgctcgccattt
acagtattaccagccctcatgaacgagtacagagtaccagaattgaatgtacagaatggt
gtactcaaatcattatcatttttgtttgaatatattggagaaatgggcaaggattacatt
tacgcggtttgtccattgcttgaagacgctcttatggacagggatctggtccatagacaa
acagcttgtgcggctataaagcacatggcgctgggtgtgtacgggttcggatgtgaagac
gctttagtgcatctactgaatcacgtgtggcccaacatttttgaaacatcgccgcattta
gttcaagccttcatggacgccgtggaaggaatgagagtcgcgcttggtcctgttaaaatc
ctccagtatgcactccaaggcctattccaccccgcaagaaaagtacgtgacgtctattgg
aaaatttataacaccttgtatattggagggcaggacgcgttagttgcgggatatcccaga
atacaaaacgatccaaataatcactacctaagatatgaactagattatttgctctaa

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