Trichoplusia ni (cabbage looper): 113507019
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Entry
113507019 CDS
T05757
Name
(RefSeq) tetratricopeptide repeat protein 37
KO
K12600
superkiller protein 3
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113507019
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tnl03019
]
113507019
Messenger RNA biogenesis [BR:
tnl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
113507019
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_8
TPR_14
TPR_19
TPR_12
TPR_17
TPR_16
TPR_11
TPR_CcmH_CycH
ANAPC3
TPR_6
TPR_7
ARM_TT21_C
SNAP
ChAPs
HEAT_Nup120
Motif
Other DBs
NCBI-GeneID:
113507019
NCBI-ProteinID:
XP_026745676
UniProt:
A0A7E5WZQ4
LinkDB
All DBs
Position
Unknown
AA seq
1273 aa
AA seq
DB search
MADIKTLLKDARKLIDEKDYKGAQECCKNILRKDKQNYFGLVLLGKSLQDSEQAPLAYQK
AIASKPDHPLAWQGLANYYERKENTSDKTKLFGIYNEMLNLQMEEEKSIEIIIKLGQLGC
ELKSIEALSIIANFLLKDNVLSLNKAAEKQFMDLLKSNITVDDENIPVILKSLHKMYSED
PNDSLEILLCKVIIRKSDFASAVEEIINLKFFPNNVLLRDWLCKQLCSKYAEDMSFSGFQ
IENHIDTISEGIMNSKYPSLLRSMLCYDKGLYLEAYKQCVPLINYQEADITEATFVIKCT
IMLKKWSVTQKLASNFLTKVKDEKFATTLKRFLILSLTKQQKWKQAISHAQEIPIESLDN
LELASLAECCIEAGEPADHIMNHLVSTEYYKQLQALLLLKQNKYDQVIELLEGSAEGSLH
IFYLGKAYWELKQYDKCIIYLLKAAKLNPDHADTFLYLGHFYHHHKSDLQKAKKCYEKAQ
SINPINMTIAKSLSEIYVKLQQRDDDFELLNSLAKSSSNIEPWVNFRLGLHYSNRREWEN
AILNFRNVIKLNQNDTTAFECLADAYYSRGSYTSALRAYNKVMSLDQSKSAHCLTRIGLI
YSLLTQYEEAVSTFEKVFVIDPYSFLALKGIAETWMRIAKKKVEAKIFGTARDCAQHAID
YITKALSKQNQFLCFWRLLADNLMFITKLPNKYAFVNMPVLSKESGNNFEISKKEKLEIF
PQAIACYSHIAKQNQQVSSYDLASAYLAFYNENKKIVNCHISFNLTLNCIKERPTLWRNW
NLLGKICLAIKKYEIAQHCFIKALLVTRKWSVAKIWCNLGTLYLKLKLYKLSNYCFSRGQ
SALPSHPQSWIGQALIAEAIREEEAMDLFRHASRLGYHPESALGYADWVCRTLKNNKYKE
NSESKYEIEGLFAIPYAIDLVEWYCNFESSDPCAYNILGILQERFGLIRSAIQSYEKAFE
YASDDKKNITLLNIGRILVRMEKYDEAIKIYKAITEASLESTTGLAFALFKNNLYEESYS
VYDTALHWLSNSEAEKADLLVAMAGIVYMHKGADDAKTILFHSIQVSHKKPTPHSLFAIC
SLGLIQSDQGLSKLALSELRKYERESRYGYDIGFLKSYISVCEDNMGQAIKLLSDCLHDH
PSNALLWFCMAQYCLKATNTKAKVASCCAQKALSSAHHGEFDCNFGKILASASIAEHLAG
DKNKALLLAKGGLHMYPNQAEIWAALLFSLLAHKVWSENKKWLLGATAHMRKSLNISRPL
GRWLILMEKKLCK
NT seq
3822 nt
NT seq
+upstream
nt +downstream
nt
atggcggatattaaaactttacttaaagatgcaagaaaactaattgatgagaaggattac
aaaggtgcccaagaatgctgtaagaatatattaagaaaagacaagcaaaattactttggt
cttgtattactgggtaaatccttacaagattctgaacaggcaccactggcctaccagaaa
gctatagctagtaagcctgaccaccctcttgcctggcaaggacttgccaactattatgaa
aggaaagaaaatacctcagataaaacaaaactatttggtatttataatgaaatgttaaat
ttgcaaatggaagaagaaaaatctattgaaatcataataaaactaggtcagttaggatgc
gaattgaaaagtattgaagctttgtctataatagccaattttttgttgaaagacaatgta
cttagtttgaataaagcagcggaaaaacaattcatggacttattaaaatctaatattaca
gttgatgatgaaaatatacctgtaattctaaaatcattgcacaaaatgtacagtgaagat
cccaatgattctcttgaaatattgctatgcaaagtgatcattagaaaatctgattttgca
tctgctgttgaagaaataataaatctaaagtttttcccaaacaatgtgctattgagagac
tggctgtgtaaacagctttgttctaaatatgcagaagatatgtctttcagtggctttcag
attgaaaatcacatagacacaatcagtgaaggcatcatgaactctaaatatccaagtctt
ctgagaagtatgttatgctatgacaaaggcttgtaccttgaagcatacaagcaatgtgtt
ccattgattaactatcaagaagctgatatcactgaagccacatttgtaattaaatgtaca
atcatgttgaaaaagtggtcagttacacaaaagcttgcaagtaactttctcaccaaggtc
aaagatgaaaagtttgcaaccactcttaaaagattcttaatcctgtctttaaccaaacaa
cagaaatggaagcaagcaatatctcatgctcaagaaatacccattgaatcattggacaat
ctagagctggccagtctagcagagtgttgtattgaagctggtgaaccagctgaccatata
atgaaccatctggtatctaccgaatactacaaacaactgcaagctctacttcttttgaag
cagaataaatatgatcaagtgattgagttgttagaaggttcagccgagggttcattacac
attttctatttgggaaaagcttactgggaacttaaacaatatgataagtgcattatatat
cttttgaaagcagccaagttgaatcctgatcatgctgatacattcttatatttaggccac
ttttaccatcatcataaaagtgatttacagaaagctaaaaaatgttatgaaaaagcgcaa
agtatcaatcctattaacatgactatagctaagagccttagtgaaatttatgtcaaattg
cagcagagagatgatgattttgagctattaaattcattagccaagagttcttcaaacatt
gaaccttgggtcaacttcaggttaggccttcattattcaaataggagagaatgggagaat
gccattttaaattttagaaatgttataaaattgaatcaaaatgatactactgcatttgag
tgtctggcagatgcatactattctcgaggttcttatacatcagcattgagagcatacaac
aaagtaatgagtttagatcaaagcaaatcagctcactgtcttacaagaataggcctcata
tattcattgttaacccagtatgaagaagctgtatctacattcgaaaaggtatttgtaatt
gatccttattcattcttggctctcaaaggcattgctgagacttggatgagaattgcaaag
aaaaaagttgaagctaaaattttcggaactgctagagattgtgcacaacatgcaatagat
tatattacaaaagcattatcaaaacaaaatcaatttttatgtttttggagactgttagct
gacaacttgatgtttataactaaattgccaaataaatatgcctttgttaatatgcctgta
ctatcaaaagaaagtggcaataactttgaaatatctaagaaagagaaacttgaaatattc
cctcaggccattgcctgttattctcatatagcgaaacaaaatcagcaggtgtcatcatac
gatttagcgtcagcatatttggctttttataatgaaaacaagaaaattgtcaactgtcac
atctcctttaacttgacattaaattgcattaaagaaagacctacactttggagaaactgg
aatttacttgggaaaatatgtttggctatcaaaaagtatgaaattgcccagcattgcttt
atcaaagctcttttagtgactaggaaatggtctgttgcaaagatttggtgtaatctgggg
acattatatctgaaattaaaactatacaaattatctaactactgtttttcacgtggacaa
tcagcgctaccgtcgcatcctcaaagttggattggtcaggcattgattgcagaagcgatt
cgagaagaggaagctatggatctgttcagacatgcttctcgcttgggataccacccagaa
agtgcacttgggtatgctgattgggtctgcaggactttaaagaataacaagtacaaagaa
aactctgaatcgaaatatgaaatagaaggtctttttgctataccttacgctattgatctg
gtagagtggtattgtaacttcgaatcttcggacccttgcgcatacaacattctcggaata
ttacaagagaggtttggcctgatccgatctgctatacaatcttatgagaaggcatttgaa
tatgcaagtgatgataagaaaaatattactcttcttaacattggaagaattctagtaagg
atggagaaatatgatgaggcaattaagatatacaaagctataactgaggcaagcctggaa
tccactactgggttagcatttgcgctttttaagaataacctttatgaagaaagttactct
gtatatgacactgcacttcattggctgagcaattcagaggccgaaaaagcagatcttctg
gtagctatggctggtattgtatacatgcataagggagcagatgatgcaaaaactatcttg
ttccatagcattcaagtatcacacaagaagccgacgccgcacagcttgtttgcaatctgt
tctttagggttgatccagtctgatcagggtttgtcaaaacttgcattaagtgaattacga
aaatatgagagggagagcaggtatggatatgatatagggtttttgaagtcctatatctct
gtttgtgaagataatatgggccaagctataaaactactaagtgattgtctacatgatcat
cctagcaatgccctcttatggttctgcatggcacaatattgccttaaggctactaataca
aaggctaaagttgcgagctgttgtgctcaaaaagctttatcctcagcccatcatggtgaa
tttgattgcaactttggtaaaatattggcatcagctagtattgccgaacacttggcagga
gataagaacaaagccttgttattagccaaggggggactccatatgtatccaaatcaagca
gaaatatgggcagcacttttgttttcactgctagctcataaagtgtggagcgaaaataaa
aaatggcttttaggagccacagcacatatgcggaaatctttaaatatttcaagacctctt
ggacgatggttgattctcatggaaaagaaactgtgcaaataa
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integrated database retrieval system
