Trichoplusia ni (cabbage looper): 113507644
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Entry
113507644 CDS
T05757
Name
(RefSeq) ubiquitin conjugation factor E4 B
KO
K10597
ubiquitin conjugation factor E4 B [EC:
2.3.2.27
]
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl04120
Ubiquitin mediated proteolysis
tnl04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
113507644
04120 Ubiquitin mediated proteolysis
113507644
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tnl04121
]
113507644
Enzymes [BR:
tnl01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
113507644
Ubiquitin system [BR:
tnl04121
]
Ubiquitin ligases (E3)
U-box type E3
113507644
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ufd2P_core
U-box
Motif
Other DBs
NCBI-GeneID:
113507644
NCBI-ProteinID:
XP_026746339
UniProt:
A0A7E5X0Y2
LinkDB
All DBs
Position
Unknown
AA seq
1239 aa
AA seq
DB search
MSELSQEEIRRRRLARLAALGGAGSAPSPASPPVTPGASMPLPDMQTSSQAVPRGSTEPS
TPDVANTNKEPNFADGVKSEVDDQSKIPPDGLIVTEKTDNNLLDEMPDTKMTDLSQTRQY
NSFDSMGDDTLLSCGSVRVTSLPQTTVSGSEGASIREDSTSRSISPAQFAEPSPVRPRPS
NASPSCSRRSLSMEVDDVSERNSQSEQQQEPMEVDDNDNTTASPARKIHRSRTVSCTELT
EEQLRNIVAKILQVSWSEDSAGGIFVPSVAAALLDNPKLSLDELASGALIDVITQIADGS
DPLNQKLIAITETTKRPSEECGDDMLTSGPVGSETETDKADCPTPSLPLPKTIPTQGLAV
SYIIRFYTNINSYEREYSKKSSEPPLSDLLQSLRTLLVNHLVLVLRGEFDLERCRKSALL
PYMLVVSPPTGLIPELLLATYSDREVFEEVFTPLVLGIREEMRRAVSPLGGRGACGGGGA
LRALRALCELRAGPRHARRPLAELLARLPSLCPDPVTTAPGREIARVSFLGPFFAISLFA
EENPRLAERLFTMGSGDRSLAFALQREVEASRNTLHNICHNILLCPDAREPLLNYFAALL
QRNERRAQLQTDERSLAGDGFMLNVCSVLQLLSVRIKLERVYPLYTFQPGSWVNVRDETR
LYFTAQEAQDWLDSLNKDPNHKWPEAKFQTVCWFLTLHMHHVALIPALHTHQRRIRAFRD
LQKVIEELMAAEPQWRNSFQALRNRELLRRWRRQIKRLHRSKQCAETALLEGELMRRSLQ
FYASVCALLTQQLQAALAAAPAAPAAPAGPAGPAADHSLADAFAATPEWYVEDIAEFMLF
AVQYVPQIVADYIEDPIITWLLSAICHSRLFKNPYLVAKIVEVLFVINLSVPLKLKNVYE
KFMDHPMSQTALPSALMKFYTDIETTGQSTEFYDKFTIRFHISIILKGMWERPIHKQAIV
KESRSGRQFVKFINMLMNDTTFLLDECLTYLKRIHEAQEGAAGASASAEARARALAQDER
QCRSYLTLARETVDMLEYLTVEIKEPFLRAELVDRLASMLNFNLQQLCGPKCKNLKVRRP
EKYGWEPRRLLSQLVDIYLHLDSPLFHAALAADERSFRKELFEEAAVRLAKSCIKTPTEI
ERFKSLADNAYQIAISNQQKSDEFADAPEEFRDPLMDTLMTDPVLLPSGKIMDRSVILRH
LLNSATDPFNRQPLSEDQLRPATELKEKINQWQREKKAS
NT seq
3720 nt
NT seq
+upstream
nt +downstream
nt
atgagtgagctgagtcaagaagagatacggagacgtcgcctggcgcgcctcgccgctctc
ggtggcgcaggctcggcaccgtcgccagccagccctccagtcacaccaggcgcttcgatg
cctttaccagatatgcagacctcctcacaagcagttcctcgtggctccacagaaccttcc
actcctgatgtagccaacacaaacaaagaaccaaatttcgccgatggagttaaaagcgaa
gtagatgaccagtcaaaaattccacctgacgggttgattgtgactgaaaagacagataat
aatctattggatgaaatgcctgataccaagatgacagatctgtcacaaacacgacagtac
aacagctttgattccatgggtgacgacacactgttgagttgtggatcagtcagagtgacg
agtttaccacaaactacagtaagcggttctgaaggggcctcaataagagaagacagtact
tcacggtcaatatctccagcacagtttgcggagccatccccagtgcggccgcggcctagc
aatgcctctccgagttgctcacggcggtcactctctatggaggtggatgatgtgtctgag
aggaactcacaatcagaacaacaacaggaaccaatggaggtggatgacaatgacaatacg
actgcgtcgccagctcgtaaaatacaccggtcgcgcacagtgagctgcacagagttgaca
gaagaacaacttaggaatattgtcgccaagatcctgcaagtgtcatggtcagaagatagt
gcaggaggaatattcgtgccatctgtcgcagcagcactgcttgacaaccctaaactaagc
ctagatgagctcgcatcaggggccctgattgacgtcattacacagatagcggacggctca
gatccactcaaccagaaactaattgcgattactgaaactacgaaaaggcccagtgaagaa
tgcggagacgatatgttgacgagtggtccagttggttcagaaacagaaactgataaagca
gactgcccaacgccatcattgcctcttccgaagacaatacccacgcaaggtctcgctgtt
agctacattatacgtttctacacaaacatcaactcatacgagcgggaatactcgaagaaa
agttcggagccgcctctgagtgacttgcttcagagtttaagaacattactagtgaatcac
ttagtgcttgtgcttcgcggcgaatttgacctggagagatgcaggaagtccgctttgctg
ccttacatgctcgtagtgtcaccgcccaccggcctcattcccgaactccttcttgctacc
tacagcgatagagaagtctttgaagaggtgttcacgccgctggtgctgggcatccgcgag
gagatgcggcgcgcggtgtcgccgctgggcgggcgcggcgcgtgcggcggcggcggcgcg
ctgcgggcgctgcgcgcgctgtgcgagctgcgcgccgggccgcgccacgcgcgccgcccg
ctggccgagctgctggcgcgcctgcccagcctgtgccccgaccccgtcaccaccgcgccc
ggccgggagatcgcgcgcgtcagcttcctcggacccttctttgctatatcattgtttgcg
gaagagaatcctcgtttagcagagcgtttgttcacgatggggtccggggaccgcagcctg
gcgttcgcgttgcaacgcgaagtcgaagcaagccgtaacacgctacacaacatctgccac
aacatacttctgtgccccgacgctagggagcctcttctcaactactttgctgcgcttcta
cagaggaacgaaagacgagcgcagttgcagactgatgagcgatctcttgctggcgatggc
ttcatgctgaacgtgtgttcggtactgcagctgttgtcggtccgcatcaagctggagcgc
gtgtacccgctgtacacgttccagcccggctcgtgggtcaacgtccgcgacgagaccaga
ctctacttcactgctcaggaggcacaggactggctggattcactcaataaagaccctaac
cacaaatggccggaagcgaagttccagacagtgtgctggttcctgacgctgcacatgcac
catgttgcgctcataccggcccttcacacgcaccaacgacgaattcgggcattccgtgat
cttcagaaagtgatcgaagagttgatggctgctgagccacagtggcgtaacagtttccaa
gcgcttcgcaaccgcgaactactgcgcaggtggcgccggcaaatcaaaagactacacagg
tccaagcagtgcgcggagacggcgctgctggagggcgagctgatgcggcgcagcctgcag
ttctacgcgtccgtgtgcgcgctgctcacgcagcagctgcaggccgcgctggccgccgcg
cccgccgcgcccgccgcgcccgccggccccgcggggcccgccgccgaccactcgctggcc
gacgccttcgccgccacgcccgagtggtacgtcgaggacatcgccgagttcatgctcttt
gccgtgcaatatgtaccacaaatcgtggcggattacatagaagacccaatcataacatgg
ttgctaagcgctatatgccactcccgtctattcaaaaatccgtacctcgtcgcaaagata
gtggaagttctcttcgtgataaatctatccgttcccctcaaattgaagaatgtatacgaa
aagttcatggaccacccgatgtcgcagacagctttgccgagtgccctcatgaagttctac
acggatatagaaactactggacagagcacggagttctacgacaagttcacaatccgattc
cacatcagtattatactgaagggcatgtgggaaagacccatacataaacaggccatagtg
aaggagtcccgctcgggccggcagttcgtcaaattcataaacatgctgatgaacgatact
acattccttcttgatgagtgtctcacgtacctgaagcgcatccacgaggcgcaggagggc
gcggcgggcgccagcgccagcgccgaggcgcgcgcgcgggccctcgcgcaggacgagagg
cagtgccgctcatacctcacgctcgccagggagacggtggacatgctagagtatttgaca
gtggagatcaaggagcccttcctccgggccgagctggtcgacaggctcgcgtccatgctt
aacttcaacctccagcagctatgcggacccaaatgcaaaaaccttaaggtccgtcggcca
gagaaatatggatgggaacctcggcggctgctcagccagttggtagacatctacttgcat
ctggactcaccactattccacgctgcactcgccgctgatgagagatcattccgtaaagag
ttgttcgaggaagcagccgtgcgactggccaagtcgtgcatcaagacaccaacggaaata
gagcgcttcaagtcgctcgcagacaatgcttatcaaattgcgatatccaatcaacagaaa
agtgatgaatttgctgacgctcctgaagagttcagagacccgcttatggacacccttatg
actgacccagttttattaccatctgggaagataatggaccgatcggtgatcttgcgtcac
ttattgaacagcgccaccgatccctttaaccgacaacctctatccgaggatcaactgcgt
ccagcaactgagcttaaagagaagatcaaccaatggcagcgcgagaagaaagcgtcgtaa
DBGET
integrated database retrieval system
