Trichoplusia ni (cabbage looper): 113507682
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Entry
113507682 CDS
T05757
Name
(RefSeq) LOW QUALITY PROTEIN: probable ribonuclease ZC3H12D
KO
K18668
ribonuclease ZC3H12 [EC:3.1.-.-]
Organism
tnl
Trichoplusia ni (cabbage looper)
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tnl03019
]
113507682
Messenger RNA biogenesis [BR:
tnl03019
]
Eukaryotic type
mRNA degradation factors
Other degradation factors
RNases
113507682
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Zc3h12a
UBA_6
Regnase_1_C
zf-CCCH
zf-CCCH_4
RuvA_C
PaaX
Motif
Other DBs
NCBI-GeneID:
113507682
NCBI-ProteinID:
XP_026746385
UniProt:
A0A7E5WZS1
LinkDB
All DBs
Position
Unknown
AA seq
575 aa
AA seq
DB search
MSQDTDLIISVPRSRINEFYCKYYNLVETFYCVTLSESKLCPANEKPDYVYFNVTFNLNP
ADGSFNPKELVGRIQKYVESSLGWAVERGEDSSYDSECEDESAHRAASRTPSDTLAAEFA
EYVTLTPTPPNQAKIEFAMKLGYSERLARTALQRLGPDPPCNELLAELIKLAAKQPPRAL
SPAPPAEPEAAERGALRHIVIDGSNVAMSHGNKEVFSCRGIEICVEWFRARGHREITAFV
PKWRKEASRPNNPIAERDALERLERERVLVYTPSRLLGGKRLVCYDDRYILRLAAETDGI
VVSNDNYRDLASENPEFRKVVEERLLMYSFVNDRFMPPDDPLGRSGPTLDAFLRAPATRV
EPPPACPYGRKCTYGNKCKFHHPERAGRPHKSVAEKLSERAAKTLRARDLHTVSLPPGGR
PADVKRQLARAQSAAPRLADPTLATHFDRAQVAGPSQPPPPDVNTHRKLARQLTLNPSCD
PRLQAHSLAARVASAPGGAAAGLLAPRVAPAASDGALQHWDARRRMHYHLAGIFPEAQVA
AAMAAYPDETDAQTMCAIILARYRPSEAPPPRAPH
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaggatacggatctcataatatcagtgccgcgttcccgtatcaatgaattttat
tgtaaatattataatttagttgaaacattttactgtgtcacactgtctgagagtaaattg
tgtcccgcgaatgaaaaacctgattatgtgtatttcaacgtcacttttaacttgaatcca
gcagatggaagttttaatcctaaggagttagtaggaagaatccagaaatatgtggagtca
tcgttggggtgggctgtggagcgaggcgaggactctagctatgactcggagtgtgaggac
gagagcgcgcacagggcggcctcacggaccccctcggacacactcgccgccgagttcgcg
gagtatgtcacactcacaccaacaccacccaaccaggcaaagatcgagtttgccatgaag
ttgggttactctgagcgtttggcgcggacggcgctgcagcggctgggcccggacccgccc
tgcaacgagctgctggcggagctgatcaagctggccgccaagcagccgccgcgcgcgctg
tctcccgcgccgcccgccgagcccgaggccgccgagcggggcgcgctcaggcacatcgtc
atcgatggcagcaatgtcgctatgagtcacggcaacaaggaggtattttcgtgccgcggc
atcgagatctgcgtggagtggttccgcgcgcgcggccaccgcgagatcaccgccttcgtg
cccaagtggcgcaaggaggcgtcgcgccccaacaaccccatcgccgagcgcgacgcgctg
gagcggctcgagcgcgagcgcgtgctcgtgtacacgcccagccggctgctcggcggcaag
cggctcgtctgctacgacgaccgctacatcctgcgcctcgccgccgagaccgacggcatc
gtcgtctccaacgataactaccgcgacctcgccagtgaaaatccagagtttcggaaagtc
gtagaagagcggctgctcatgtactcattcgtcaacgaccgtttcatgccaccggacgat
cctcttggtcgctctggacctacgctggacgcgttcctgcgcgcgcccgccactcgcgtg
gagcctccacccgcctgcccttacggccgcaagtgcacgtacggcaacaagtgcaagttc
caccaccccgagcgcgccggccgcccgcataagtctgtcgcggagaagctttctgagcgg
gccgccaagaccctgcgagcacgtgacttacacactgtgagcctaccgcccggcggccgc
cccgctgatgttaagcggcagctcgcacgagctcaatccgctgctccacgactcgcagat
cctacgctggcgacgcacttcgaccgcgcgcaagtggcaggaccctcgcagccgccgccg
cccgatgtcaacacgcaccgtaagctggctcgccagctcacgctgaacccgagctgcgac
ccgcggttgcaagcgcactcgctggcggcgcgcgtggctagcgcgccgggcggggcggcg
gcgggtctgctggcgccgcgcgtggccccggccgcgtcggacggcgcgctgcagcactgg
gacgcgcggcgccgcatgcactaccacctggccggcatcttccccgaggcgcaggtggcg
gcggccatggcggcctacccggacgagacggacgcgcagaccatgtgcgccatcatcctg
gcgcgctaccggcccagcgaggcgccgccgccgcgcgctccgcactga
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