Trichoplusia ni (cabbage looper): 113508016
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Entry
113508016 CDS
T05757
Name
(RefSeq) lys-63-specific deubiquitinase BRCC36-like
KO
K11864
BRCA1/BRCA2-containing complex subunit 3 [EC:3.4.19.-]
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
113508016
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tnl01002
]
113508016
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tnl04121
]
113508016
03036 Chromosome and associated proteins [BR:
tnl03036
]
113508016
03400 DNA repair and recombination proteins [BR:
tnl03400
]
113508016
Peptidases and inhibitors [BR:
tnl01002
]
Metallo peptidases
Family M67
113508016
Ubiquitin system [BR:
tnl04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
BRCC complex
113508016
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
113508016
BRISC complex
113508016
Chromosome and associated proteins [BR:
tnl03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
BRISC complex
113508016
DNA repair and recombination proteins [BR:
tnl03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-A complex
113508016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JAB
BRCC36_C
Prok-JAB
UPF0172
Motif
Other DBs
NCBI-GeneID:
113508016
NCBI-ProteinID:
XP_026746765
UniProt:
A0A7E5X0S5
LinkDB
All DBs
Position
Unknown
AA seq
264 aa
AA seq
DB search
MLNKVLLSSDVALVCVQHALSTEKEEIMGLLLGEVDSNGSLVSVVSSVILRRLDKKPDRV
EISEEQLVQATLRAEELAAEVNRPLRVVGWYHSHPHITVWPSHVDLATQYMYQRMDASFV
GIIFAVFLTDQSTKAPSIQITCFQSVNDGSSQSRREIEMEIINDNNSLLLNNLETLTQLP
AILKEEEDESYTNEVGPNETDDIINRQHNAAVRTIAIGHIVDKMSRPMLEGLVARNTLNT
VRLKALKKQHQQMMSKLENMPCNV
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgctgaataaggttttactttcttccgatgtcgccttggtttgtgtacaacatgcatta
tcaacggaaaaagaagaaataatgggcctgcttcttggagaggttgacagcaatggatct
ttggtgtcagtagtgtcctctgttattttacgtcgtttagacaaaaagcccgatcgagtt
gaaatatcggaggaacagttggtacaagctacattgcgcgcagaagaattagctgctgaa
gtaaatagaccacttagagttgttggatggtatcattcacatcctcatatcacagtgtgg
ccatcccatgttgatcttgctacacaatatatgtatcaaagaatggatgctagttttgtt
ggaattatatttgcagtatttcttaccgatcagtctacaaaagctccttcgattcaaata
acatgtttccaatccgttaatgatgggtcaagtcagagtaggagggaaattgaaatggaa
ataataaatgataataactctttattgttaaacaacttggagactcttacccaattgcca
gctatattaaaagaggaagaagatgaatcttataccaatgaagtgggtccaaatgaaact
gatgatataattaacaggcaacataatgcagcagtgagaactattgcaataggacatatt
gttgataagatgtcgagacctatgctagagggtcttgtagccagaaatactctaaacaca
gtaaggctaaaagctctaaaaaagcaacatcagcaaatgatgtccaagttggaaaatatg
ccctgtaatgtatga
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