Trichoplusia ni (cabbage looper): 113508292
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Entry
113508292 CDS
T05757
Name
(RefSeq) intraflagellar transport protein 88 homolog
KO
K16474
intraflagellar transport protein 88
Organism
tnl
Trichoplusia ni (cabbage looper)
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tnl03037
]
113508292
Cilium and associated proteins [BR:
tnl03037
]
Primary cilia and associated proteins
Intraflagellar transport (IFT) complex B1
113508292
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GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_6
TPR_12
TPR_19
TPR_11
TPR_7
TPR_16
TPR_10
TPR_14
ANAPC3
RNPP_C
ARM_TT21_4th
RPN7
Iml2-TPR_39
HAT_PRP39_C
TPR_Slam
Motif
Other DBs
NCBI-GeneID:
113508292
NCBI-ProteinID:
XP_026747039
UniProt:
A0A7E5X300
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Position
2:13936470..13946236
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AA seq
840 aa
AA seq
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MLSSRYYSASRLGTDAKPRTAMLVDEDDELYAGFNDVAPALDTRNLRHDQDFQDTLRTAG
IGRKPPARVPTGMMRMSTVSVRGNSSRAATAARPVTAVRAAGYTSTTRDIPTRDDVKEDS
IEERVKQMEARIMTLVEESCMLSARTDPDDDNAPKKDVDLGQALAKAQEASALERQLIRM
QEQANVGDTHNLDLTFAVLCNLAGQYALNEMYTEALNTYQLLTRNKLFPHANRLKVNMGN
IYFKMGEHPKALKLYRMALDQTPTAEKDLRMKVMHNIGLLLVRMGKFRDAVTNFQHIMHE
QGDFQTGLHLVLCSVALNDAEGAKAAFHAMLDVEPPTFHQDITIDDENDAYECVVRDVVR
GDRLARWSRRAAAHAERCLALAAAAAAQRPASRGPDSGGMSWCVEALRGYSGGAAGARLE
LGGALAALRSLRPPAAPAAARALMRLKAVARAHPHDRVLRAEANTDAAFVAYALGNSTEA
LQLSEAASRDDPYACAARVTGALAAARAASAPASGPAPPPSPAAPAWRKAADQLAAATHL
DPADLIAAHDLALALERTGEESAMSGAIARWSLIRNASGAGATLRALAAAGLARQHRARQ
DAAAADHWYSLIGSWDAGVTCELAQLHSEMGDTQTAKHHYQDVEAVWPCELSALEWLASE
AQPDVALQYYRRAARLQPNNPQWGLLMGACLRASGRYQEALTLYKKMNARFPDNVQCLKL
IVKLCGDQGLEETTSWARELQRAQARVKQKEQVSVTSAGSISSGASQSPIDQIRGGSRVD
SAPGAAASRRSSDARADNTYTFTTTPNQDGLQPASRAMNRSDVRRKHVEEFDDDLPLPPE
NT seq
2523 nt
NT seq
+upstream
nt +downstream
nt
atgttgagttcgcgttattatagtgcgtcgcggctgggcacggacgccaagccgcggacc
gccatgctcgtggacgaggacgacgagctgtacgccggcttcaacgacgtggcgcccgcg
ctcgacacgcgcaacctgcgacacgaccaggacttccaggacacgctgcggactgccggc
atcggccgcaagccgcccgccagggtgcccaccgggatgatgcgcatgagcacggtgagc
gtccgcggcaacagttcgcgcgcggccaccgcggcgcggcccgtgaccgccgtgcgcgcc
gctgggtacacgtccaccacccgcgacatacccacgagggatgatgtcaaggaggatagt
attgaagagcgggtaaaacaaatggaagctcgtataatgacgctggtggaagagtcgtgc
atgttgagtgctcgcaccgatcctgatgatgataatgcaccgaagaaggacgtcgattta
gggcaggctctggcaaaagcgcaagaagcatcggcgttagagaggcaactgatacgcatg
caagaacaggccaatgtaggagacacgcacaacttggatctcacatttgctgttctatgc
aatttggcaggccagtatgcgctcaatgaaatgtatactgaagcgttgaatacatatcaa
ctactcactagaaacaaattgttcccgcacgccaatagactcaaggtgaacatgggaaat
atttatttcaaaatgggagagcatcctaaggcgttgaaattgtatagaatggcactggat
caaactccgacagctgaaaaagacttaagaatgaaggtgatgcacaacattggtctgctc
cttgtacgcatgggcaagttccgagacgctgtaaccaattttcaacatattatgcatgaa
cagggagactttcagactggtttacacttagtactatgctcagtggcgttgaacgacgct
gaaggtgccaaagcagctttccacgcgatgttggacgtggagccgcccacttttcatcag
gacatcactattgatgatgagaacgacgcgtacgagtgcgtggtccgggacgtggtccgc
ggcgaccggctcgcgcgctggtcccgccgcgccgccgcgcacgccgagcgctgcctcgcg
ctcgccgccgccgccgccgcgcagcgccccgcctcgcgcggacccgactcgggcggcatg
tcgtggtgcgtggaggcgctgcgcggctacagcggcggcgcggcgggcgcgcggctggag
ctgggcggcgcgctggcggcgctgcgctcgctgcggccgcccgccgcgcccgccgccgcg
cgcgcgctcatgcgcctcaaggccgtggcgcgcgcgcacccgcacgaccgcgtgctgcgc
gctgaggccaacaccgacgctgccttcgtggcctatgcgttgggcaacagtacggaagcc
ctgcagctgagtgaagccgcatctcgtgacgacccgtacgcgtgcgcggcgcgtgtgacg
ggcgcgctggcggcggcgcgcgcggcctccgcccccgcctcgggccccgcgccgccgccc
agccccgccgcgcccgcctggcgcaaggccgccgaccagctggctgctgccacacacctc
gaccctgctgatcttatagctgcacacgatcttgcgctagccctggagcgcaccggcgag
gagtctgcgatgagcggcgccatagcccgctggtcgctgatccgcaacgcgagcggcgcg
ggcgccacgctgcgcgcgctggcggcggccggcctggccagacaacaccgcgccaggcaa
gatgccgccgccgctgaccactggtacagtctcatcggaagctgggacgcgggagtcacg
tgtgaacttgcgcaactgcatagtgagatgggtgatactcagactgccaaacaccattac
caagacgtggaagcagtgtggccgtgcgagctttcggcgttggagtggctcgccagcgag
gcgcagcccgacgtggcgctgcagtactacaggagagccgccagactgcaacccaataac
ccacaatggggtttactaatgggagcatgtctccgcgctagcggacggtatcaggaagct
ttaactctgtacaagaagatgaacgcgcgattcccggacaatgttcagtgtttgaagctg
atagtcaaattatgtggagatcagggacttgaggagacgacttcgtgggctcgagagttg
cagcgagcacaagcacgagtcaaacaaaaagaacaagtatcagttacgtcagccggaagt
atttcctccggggccagccagtcgccgatcgaccagatcagaggcggcagccgcgtggac
agcgcgccgggcgcggccgcctcgcgccgctctagcgacgcgcgcgccgacaacacctac
acgtttacaactacgccgaaccaggacggcttacagccggccagccgtgccatgaaccgc
tccgacgtccggaggaaacatgtagaagagtttgacgacgatctacctctgccgccagaa
taa
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