Trichoplusia ni (cabbage looper): 113508330
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Entry
113508330 CDS
T05757
Name
(RefSeq) CCR4-NOT transcription complex subunit 7-like isoform X1
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113508330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tnl03019
]
113508330
Messenger RNA biogenesis [BR:
tnl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113508330
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
113508330
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
113508330
NCBI-ProteinID:
XP_026747097
UniProt:
A0A7E5X3U2
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Position
2:complement(14370129..14373243)
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AA seq
292 aa
AA seq
DB search
MPAASFGSILASTVKDDCSIKNVWNHNLHEEFHVIRQIVQKFHWVAMDTEFPGVVARPIG
EFRSTADYQYQLLRCNVDLLRIIQLGLTFMDENGKTPPGCTTWQFNFKFNLQSLREDMYA
QDSIDLLQNSGLQFREHEEHGIEPLEFAELLMSSGIVLIDNINWLSFHSGYDFGYLLKIL
TDQNLPQEENDFFESLRLYFPTVYDVKYLMKLCKNLKGGLQEVADQLELRRVGPQHQAGS
DSHLTGMAFFKIKEIFFDGNIESTSGHLYGLGAPFASNVNNFQDNMENGNSP
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcagctagttttggatctatattagcaagtaccgtaaaagatgactgttctatt
aaaaatgtttggaatcacaatcttcatgaagagttccatgttattcgacagatagtccag
aaatttcactgggtggccatggacacggagttccccggagttgtagcaagaccaattggt
gaattcaggtctacagctgactaccagtatcagctcttgagatgtaatgtagatctatta
aggattatacagttaggtcttacatttatggatgaaaatggtaaaactccaccaggctgt
acaacttggcaatttaattttaagttcaatttgcagtctcttagagaagatatgtatgca
caagattcaattgacctgctgcaaaattctggacttcaattcagagagcatgaagagcat
ggaatagaacctctagagtttgctgaactgcttatgtcttcaggtattgtactcatagac
aacatcaattggttgagtttccattctggttatgactttggatacttattaaaaatcctc
acagatcagaatctgccacaagaagaaaatgacttctttgaaagcctaagattgtatttt
ccaacagtttatgatgtaaaatacttgatgaaactttgtaagaacttgaaaggtggattg
caagaggtagctgaccaattggaactgcgtcgagttggaccacagcaccaagccggatca
gattcacatttaacgggaatggcattttttaaaattaaggagatattctttgatggtaat
attgaaagcactagtggacatctatatggattgggagcgccatttgccagcaatgttaac
aactttcaagacaatatggaaaatgggaattcaccttga
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