Trichoplusia ni (cabbage looper): 113508331
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Entry
113508331 CDS
T05757
Name
(RefSeq) CCR4-NOT transcription complex subunit 7-like
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113508331
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tnl03019
]
113508331
Messenger RNA biogenesis [BR:
tnl03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
113508331
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
113508331
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
YceM-like_C
Motif
Other DBs
NCBI-GeneID:
113508331
NCBI-ProteinID:
XP_026747101
UniProt:
A0A7E5X3Y1
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Position
2:complement(14373667..14376627)
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AA seq
289 aa
AA seq
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MPAASFGSISQLPGTGDCGIKDVWNHNLHEEFQIIRQVVQKYHWVAMDTEFPGVVARPIG
EFRSTADYQYQLLRCNVDLLRIIQLGLTFMDENGKTPPGYTTWQFNFKFNLQEDMYAQDS
IDLLQNSGLQFRKHEEDGIEPLEFAELLMSSGLVLMDNIKWLSFHSGYDFGYLLKLLTDQ
NLPQDENDFFESLRLYFPTVYDVKYLMKLCKNLKGGLQEVADQLELRRVGPQHQAGSDSH
LTGMAFFKIKEIFFDDNIESSSGHLYGLGAPFSVNVNNFQDNGENGNSS
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgccagcagctagttttggatcaatatctcagcttccaggaactggtgactgtggtata
aaggatgtatggaatcacaatctacatgaagagtttcagataataagacaagttgtacaa
aaatatcactgggttgcaatggacacagagtttcctggagttgtagctcgccctattgga
gaattcagatcaactgctgactaccagtatcaactgttaagatgtaatgttgatctctta
agaataattcagttgggcctcacatttatggatgaaaatggtaaaactccacctggctac
acaacatggcaattcaacttcaaattcaatttacaggaagatatgtatgcacaagattca
atagatttactgcaaaattctggtttacaattcagaaaacatgaagaggatggcattgaa
cctcttgaatttgcagaattgttgatgtcgtctggtcttgtccttatggataacattaaa
tggctcagttttcattctggttatgattttggctaccttcttaagttgctcacagaccaa
aacttaccacaagatgaaaatgatttttttgagagcttaagattatactttcctacagtg
tatgatgtaaagtacttaatgaagttatgcaaaaacttaaagggtggccttcaggaggtg
gctgatcagttagagttgcgccgggttggaccccagcaccaagctggctctgattcacat
ctcaccggaatggccttcttcaaaataaaagagatattctttgatgacaacatcgaaagt
tcaagcggacatttatatggattgggtgcacctttctcagtaaatgtcaacaatttccaa
gacaatggagaaaacggaaactcctcttga
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