Trichoplusia ni (cabbage looper): 113508377 Help Entry 113508377         CDS       T05757                                  Name (RefSeq) THO complex subunit 2   KO K12879   THO complex subunit 2 Organism tnl  Trichoplusia ni (cabbage looper) Pathway tnl03013   Nucleocytoplasmic transport tnl03040   Spliceosome Brite KEGG Orthology (KO) [BR:tnl00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     113508377   09122 Translation    03013 Nucleocytoplasmic transport     113508377  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:tnl03019]     113508377    03041 Spliceosome [BR:tnl03041]     113508377 Messenger RNA biogenesis [BR:tnl03019]  Eukaryotic type   mRNA surveillance and transport factors    Transport factors     TREX complex      113508377 Spliceosome [BR:tnl03041]  Complex C   Other components    EJC/TREX     113508377  Other splicing related proteins   Spliceosome associated proteins (SAPs)    TREX complex     113508377 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Tho2 THOC2_N Thoc2 Motif Other DBs NCBI-GeneID:  113508377 NCBI-ProteinID:  XP_026747175 UniProt:  A0A7E5X1X0 LinkDB All DBs Position 2:15231711..15243231 Genome browser AA seq 1416 aa AA seqDB search MGSYAKFVSEYCKTWEKSGKEQFIKHVTQFIKDQDKSPLFSKSGKLSGISQTIYDLLLSG LRGNLKKEAVLTVLRDISVLHADIPSIILDVVCVLDAESCNDVQSEERTNFCHIVRELES FISDKLLKERLEIDTLQDVGTLKNKVFYTKFIKIKTKLYYKQRKFNLFREESEGYAKLIV ELNQEISEDTEWKNLLEIVQSLIGCFNLDPNRALDIILESFEARPHYDQLFIPLIKNYMG DPQVISEVLGFKLGNMEVLDNYKEPPPLMTVIALLLQYQVISLDDIYPWLRPDDSIMARE ADKELKAVQDYIRKLSIVSTKGPQTNGPTEYVEDKSDPQEYWSNQKLVLCEALLKVNAWR EFAALSARLPTTNMPQRPAVALCGMLHAIVEPLYRNNCRVAPKIIGKPIPPLQSVLAPPA CEIFEDMKETVIPALILLGPSLHYDPVLMYKIIRILRTARSMKEDPLHHEALTVLDAAIL PALTLMDGNCCMAEEVYTLLKLYSYQSRYCLYSRWKNEAAERIPSLIRVRGNSLQRIKHI MKRVSKENIKPQGRLIGKLSHAAPALIFDYMLLQIQTYDNLIGPVVESLKYLTGLSLDVL GYCLLEALCGGRAGGGAAHPAWLQALAAFAGAAFKKHNIELTALLQFVANRLKAQQSQDL LILKEIVQKMAGIEAAEEMTPEQLEAMAGGELLKGEAGYFSQVRNTKRSSARLKEAIVGN NLDISLCILSAQQRHCCVWKEYEDDFASSGEPPGSQLKVVGRLADQCQDALVQLGTFLAS SHAPDEYAARLPPLQELLRDYHVDADVAFFLHRPVLAQKISAKVESLRKLTDSKSDSSEK AIERYTQAAQEALEPVIQSVTPILPIKVWEDISPEFYVTFWSLSMYDLRVPEESYDREID RLKIAAANATKDTSQGSKGKKEQERFNALIDKLQEERRRQQAHARAVRARLSRECGGWFP ARAAKSAKNETVTRLMQLCLFPRCVFTAADALYCAEFVHTVHSLRTPNFSTLLCYDRLFC DITYSVMSCTEGEAARYGLFLCKVLGTAMRWHGDKAAFHRECAHYPGFVTKYRVSNQFTE ANDHVGYENYRHVCHKWHYKITKAMVVCLDSGDYVQIRNALIVLIRVLPHFPVLAKLAQI IERKIDKVKEEEKTQRQDLYVLATGYSGQLRNKGPNMMRESDFHQVGDKHKIAGAAASVP VAATKEDSSAPKPEQETAASPPQAVDVDKKETRADRRREEVDRDKESKRESRSTLKERTK EEIRSKERSPRERSHREERYLETVSPPHDHRSIPDDVDREAKRRKVENSGNGKGSKEIEE RSPEKEKRKAKLRGDERKERKMNRKRDRAEESAILEQKRRRDEQKALIKMGSHQNGSQED HHYEKYHKREKSPFRDRSHEEPRDKHRRSNESKIRR NT seq 4251 nt NT seq  +upstreamnt  +downstreamnt atggggtcgtatgcgaaatttgtttcggaatactgtaaaacttgggagaaatccggcaag gagcaatttataaaacatgtgactcaatttattaaagatcaagataaaagtccactattc tcaaaatctgggaaactgtctggtatatctcagactatttatgatctattgcttagtggt cttcgagggaatcttaagaaagaagctgttcttacagtattgagggatatttctgtgttg catgctgatatcccgtcaattatactagatgtagtctgtgtacttgatgctgagtcctgt aatgatgtgcagagtgaagaacgcacaaacttttgtcacattgttagagaacttgagtct ttcatatcagataaactactaaaggaaagactggaaattgacacacttcaagatgttggt acattgaagaataaagtcttttatacaaagttcattaaaatcaagacaaagttgtattat aagcaacggaagtttaatttatttagggaagaaagtgaagggtatgcaaagttgattgtt gaattaaatcaggaaataagtgaagacacagaatggaaaaacctgttggaaattgttcag tcgctaataggttgttttaacttagatcccaatagagcattagatataattttagagtca tttgaagcacgtcctcactatgatcagctctttatacccttaattaaaaactacatgggt gatcctcaagtgatctctgaagtgttaggatttaaactagggaatatggaagtgcttgat aattataaggaaccaccaccgctgatgactgttatagcattactattacaatatcaagtg atatctcttgatgacatatatccatggttacgaccagatgactccataatggctagagaa gcagataaggaattgaaggctgttcaagattacattcgtaaactgagcattgtatctaca aaaggacctcaaactaatgggccaactgaatatgtagaagacaaatcagacccacaggag tattggagcaatcaaaagttggttctgtgtgaagcattgctgaaagtgaacgcttggcgt gaatttgcggctttgtcggcgcgcctgccgaccacaaacatgccgcagcgtccagccgtc gcgttgtgtggaatgctgcatgctattgtagaacctttgtacagaaacaactgtcgagta gccccaaagattatcggtaaacccatccctccacttcagtcggttctagcacctccagca tgtgagatatttgaagatatgaaagagacagtcatacctgctttgattttattaggacca tcccttcattatgatcctgtgttaatgtacaaaataattcgtattctacggacggctcgc tcaatgaaagaggaccctttgcatcatgaagcactaacagtattagacgcggccatattg ccggctcttactctgatggacggcaactgttgcatggctgaggaagtttacaccttgttg aaattatattcatatcaaagcagatactgtctatattctcgttggaaaaatgaggctgcc gaaagaataccatccttaattcgagtacgcgggaattccctccaaagaatcaaacatata atgaaacgtgtgtcgaaggaaaatattaaaccacaaggtcgtctcatcgggaaactatcg catgcagcgccagctttaatattcgattacatgttgctgcagatccagacgtacgacaac ctgatcgggccggtggtggagtcgctgaagtacctgacggggctgtcgctggacgtgctg ggctactgcctgctggaggcgctgtgcggcgggcgcgcgggcggcggcgcggcgcacccg gcctggctgcaggcgctggccgccttcgcgggcgccgccttcaagaagcacaacatcgag ctcaccgcgctgctgcagttcgtcgccaaccgcctcaaggcgcaacagagtcaagatctt cttatactaaaagagatagtccagaaaatggctggtatagaagcagcggaagaaatgaca cctgagcaattagaagcaatggctggtggtgaacttcttaaaggagaggctggctacttt tcgcaagtccgaaatactaaaaggtcatcggcaaggttaaaagaagctattgtcggcaac aatttggatatctccctgtgcattttatcagcacagcaacgccattgctgtgtttggaaa gaatatgaagacgattttgcttcgagtggggaaccgccgggctcccaactaaaagtagtt ggcagattagctgatcaatgtcaagacgctctagttcaactgggaacatttttggcgtca tcgcatgctccagatgaatatgccgctagattgcccccattacaggaattgctacgagac taccacgtcgatgctgatgtcgcattcttcctccatcgccctgtattagcacaaaaaatc agtgctaaagttgaatccttacgaaaactcactgattcaaagtctgattcatctgagaag gccattgaaaggtacactcaggcggctcaggaagctttggaaccagtcattcaatctgtt acacctatactcccgatcaaagtatgggaggatatatcacctgaattctatgtaacattt tggtctctttctatgtatgatcttcgcgtaccagaagaaagctatgatcgggaaatagat cgcttaaaaatcgcagcagccaacgcgactaaagatacgtcccaaggttcaaagggcaaa aaggagcaagaacgtttcaatgctcttattgataagctgcaggaggagcggcggcggcag caggcgcacgcgcgggcggtgcgcgcgcggctgtcgcgcgagtgcggcggctggttcccc gcgcgcgccgccaagtccgccaagaacgagaccgtgacgcgcctcatgcagctgtgcctg ttcccgcgctgcgtgttcacggccgccgacgcgctctactgcgccgagttcgtgcacacc gtgcactcgctaaggacgcccaacttttccacgctcctgtgctacgacagattgttctgc gacatcacgtactcggtgatgtcgtgcacggagggcgaggcggcgcgctacgggctgttc ctgtgcaaggtgctgggcacggccatgcgctggcacggggacaaggccgccttccaccgc gagtgcgcgcactaccccggcttcgtcaccaagtaccgcgtgtccaaccagttcaccgag gccaacgaccacgtcggatacgaaaactacaggcatgtgtgccacaaatggcattacaag attactaaagccatggttgtgtgcttggattcgggtgattatgttcaaatacgtaatgcg cttatcgtactcattagagtcttgccgcatttcccagtacttgctaaactggcacagatc attgaacggaaaattgataaagttaaagaagaagaaaagactcagagacaagatttgtat gtacttgctacaggctacagtgggcaattgagaaataaaggacctaatatgatgcgagaa agtgatttccatcaggtaggtgataagcacaaaatagctggtgccgctgcatcagtacct gtcgctgctactaaggaagactcttcggctcctaaacctgaacaagaaactgcggcatca cctcctcaagctgtcgatgttgacaaaaaagagacacgggctgacagacgacgtgaagaa gtagaccgcgataaggaatctaaacgcgaatcacgatctactctcaaggaaaggactaaa gaagaaataagaagcaaggaaagatctcctcgcgaacgctctcacagggaggagcgttac ctggaaactgtatcgccaccacacgatcatcgcagtattcccgatgatgtagatcgagag gcaaaacgtcgtaaagtagaaaacagcggcaatggcaagggtagcaaagagatagaggaa cgttcaccagaaaaggaaaaacgaaaggctaaattgagaggcgacgaacgtaaagagcgt aagatgaatcgtaagagggatagagctgaggaatccgcaatactagagcaaaagagacgt cgtgacgaacaaaaagctttgatcaaaatgggaagtcaccaaaatggttctcaagaagat catcactatgaaaagtatcacaagagggaaaagtcaccattccgggaccgttcacacgaa gagccaagagataaacataggcggtcgaacgagtctaaaataagaagataa

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