Trichoplusia ni (cabbage looper): 113508399
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Entry
113508399 CDS
T05757
Name
(RefSeq) exosome complex component RRP43-like
KO
K12586
exosome complex component RRP43
Organism
tnl
Trichoplusia ni (cabbage looper)
Pathway
tnl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
113508399
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tnl03019
]
113508399
Messenger RNA biogenesis [BR:
tnl03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
113508399
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
113508399
NCBI-ProteinID:
XP_026747212
UniProt:
A0A7E5X456
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Position
2:complement(15437431..15438867)
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AA seq
285 aa
AA seq
DB search
MADIYKLIHPVKYFNDYISREVRPDGREFHEQRNIKLNVNSIKSADASAVVKCGNTTVVC
GIKLELATPKAEEPDFGFVVTNIELPPLCSSKYRPGPPSDNAQVTSNLVSDIIINSKCID
LKDLCIASDKLAWVLYCDMVCMDNDGSLVDACLIALMASLKTLTLPTVTYDSETEEIAVD
TSVRSKLNVHGLPVATSFAMNTQEQRNIILADPSSYEEDMCGGLGANLIICYNKGFICGS
QKFGGSNLSTECERKAHKIAKERAQIVEEVINVCLKNYENDTNNQ
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atggccgatatatacaaacttatacatccagttaagtacttcaatgactacatatcaaga
gaagttcgtccagatggaagagaatttcatgaacaacgaaatataaaattaaatgtaaat
tcaattaaatctgcggatgcctcagctgtagttaaatgtggaaacaccactgtagtctgt
ggtatcaagttggaactagctacaccaaaagccgaagagccagatttcggttttgtagtg
acaaacatagaacttccacctttatgttcgtcaaagtacaggcctggccctccttcagat
aatgcacaagtcaccagtaatttggtatcagatatcatcattaattcaaaatgtattgac
cttaaagatctgtgcattgcatcagataaattagcatgggtactgtattgtgatatggtt
tgcatggacaatgatggcagtttagtggatgcctgtcttattgcgctcatggccagtttg
aaaacattgactcttccaacagtaacctatgactctgaaactgaagagattgctgtagat
acaagcgtgagatcaaaactaaatgtacatggactgccagttgctacaagttttgcaatg
aatacacaagagcaaaggaatattattctggccgacccatcatcttatgaagaggatatg
tgtggagggcttggtgccaatttaattatatgctacaataaaggattcatttgtggctct
caaaaatttggtggcagcaatttatcaacagaatgtgaacgaaaagcgcataaaattgct
aaagaaagagcacaaatagttgaagaagtaattaatgtttgcttaaaaaactatgaaaac
gacacaaacaatcaataa
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