Trichoplusia ni (cabbage looper): 113509040
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Entry
113509040 CDS
T05757
Name
(RefSeq) cytoplasmic FMR1-interacting protein
KO
K05749
cytoplasmic FMR1 interacting protein
Organism
tnl
Trichoplusia ni (cabbage looper)
Brite
KEGG Orthology (KO) [BR:
tnl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tnl03019
]
113509040
Messenger RNA biogenesis [BR:
tnl03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
113509040
Factors involved in mRNA localization
Other mRNA localization factors
113509040
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FragX_IP
CYRIA-B_Rac1-bd
Motif
Other DBs
NCBI-GeneID:
113509040
NCBI-ProteinID:
XP_026748099
UniProt:
A0A7E5X5P1
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Position
3:complement(5665763..5690658)
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AA seq
1268 aa
AA seq
DB search
MSVSEKVSLSDALSNVDVLDELTLPDEQPCIEAAPCSILYQANFDTNFEDRNGFVTGIAK
YIEEATVHANLNELLEEGNAHAVMLYTWRCCSRAIPQPRSNEQPDRVHIYERTVQVLAPE
VDKLLQFMYFQRKAIERFCGEVRRLCHAEKRRDFVSEAYLLTLGKFVNMFAVLDELKNMK
SSVKNDYSTYRRAAQFLKVMSDSQSLQESQNLSMFLATQNKIRDTVKDALEKINGYEDLL
ADVVNICVHMFETKMYLTPSEKHMLVKVMGFGLFLMDSEVCNINRLDQKKKIRLDRIDRI
FKNLEVVPLFGDMQIAPFNYIKRSKHYDPSKWPLSSSPTPLSPQADLMVHLPQIREEHQN
YISELARYSNEVTTTFKEAGSDAENKAVTELCLRGLQLLSSWCSVLTELCSWKLLHPTDH
ASNPRCPPDAEEYERATRYNYTSEEKFAMIEVIAMIKGLQVLMARMETVFADAARRGVFA
ELQDFVQLVLREPLRKAIKNKKDLIRSIIVSVRETCGDWARGCEPQQDPALRGKKDGEAS
FTIKVPRRNVGPSSTQLYMVRTQLEALISDKSGGRRTLRKDLDAGTLTQIEMFHRQSFYW
SYLLNLSDSLQKCCDLSQLWYREFYLEMTMGRKVNKCMVRHQHNEECNDLVTMEKRIQFP
IEMSMPWILTDHILRTKEPAMMEYVLYPLDLYNDSAQYALTVFRKQFLYDEVEAEVNLCF
DQFVYKLSEQVYAHYKQLAASMLLDKRYRAECAARGASTGAGAGRYASLLRQRHVALLGR
HVDLCALVAQRINSDMHRALDAAVAKFEAGDITGVVELEGLISVNRLCHKLLSRYLTLDD
FDAILRESDHGVLAPYGRITLHVFWELNFDFLPNYCYNAATDRFVKCRGIQFGVGVSREK
PQQYGHALLWGSKQLSLAYSAQYAQYSGFVGAQHLHALVRLLGYQGVAVVVSELLDVARG
LLHGTIAQFTRALAAAMPRHCKLPRYDYGSNGVLGYYHAQLTDIVQYPDARTELFHAFRE
LGNIILFCMLIEQALSQEEVTDLLHAAPFQNILPRPFAAEGEKPESKQKRLEAKYAALQI
VQNVDKYGTAKQGQLSREGDLLTRERLCCGLSLFSVVLRRLRGCLSAPQWPAPPTHTDDT
NEFHRLWSALQFLYCIPVGETQFTVEELFGEGLHWAGCTIIALLGQQRRFEALDFCYHIL
RVQRVDGKDEMVKDIPLKRMVDRIRRFQVLNSQIFGVLARHLAADEERAGVEHVRCFPPP
SAPQHAMN
NT seq
3807 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtgagtgaaaaagtatctttatccgatgccttgagcaatgtggatgtattagac
gagctcactttgccagatgaacagccgtgtatagaagcagcaccatgttccatattatac
caggctaacttcgacacaaactttgaggaccgcaatggattcgtcaccggtatcgccaag
tacattgaggaggcaactgtgcatgccaacctgaacgaacttctagaagaaggcaacgct
cacgccgtcatgctgtacacgtggcgttgctgcagccgcgccatcccccagccgcggtcc
aacgagcagccggacagggtccacatatacgagaggactgtacaagtactggctcctgaa
gtcgataagctgctgcagtttatgtattttcagcgtaaagctatcgaacgcttctgcggc
gaggtccgtcgcctctgccacgctgagaagcggcgcgacttcgtgtccgaggcatacctg
ctgaccctcggcaagtttgtcaacatgttcgctgttcttgacgagctgaagaacatgaag
agctccgtcaagaatgattattcgacttatagacgggccgcgcagttcctcaaggtgatg
tctgacagccagagccttcaggagtcgcagaacctgtccatgttcctcgccactcagaac
aaaataagagacactgttaaagatgccctggaaaagattaatggctacgaggatctgtta
gccgacgtcgtaaacatatgcgtgcatatgttcgaaacgaaaatgtatctgactccgtct
gagaaacatatgcttgtcaaagtgatgggattcggtctgtttctaatggattccgaagtt
tgcaacatcaatcgtctcgatcagaagaaaaagatacgtttggatcgcattgacaggata
ttcaagaatttagaagttgtgcctctgtttggtgatatgcagatagcgccatttaattat
attaagcgatcaaaacattacgatcctagcaagtggcctctatcctcgagccccaccccg
ctgtctcctcaggcagacctgatggtccacctgcctcagatcagggaggaacaccagaat
tatatctcggaactagctcggtatagcaatgaggtaacaacgactttcaaagaagccggt
tctgacgccgagaacaaagccgtgactgagctctgtctccgaggactccagctcctgtcg
tcatggtgttcagtcctgacggagttgtgttcctggaagctgctgcaccctactgaccat
gccagcaaccctcgctgcccaccagacgctgaggagtatgagagggcaacccgttacaac
tacacgtccgaagagaaattcgccatgattgaagtcatagccatgatcaagggtctccag
gtcctcatggctcgcatggagacggtcttcgccgatgcggccaggagaggagtcttcgca
gagctacaggacttcgtacagctcgttctgagggaaccactgaggaaagctattaagaat
aagaaggacttgattagaagtatcatagtatcagttcgcgaaacgtgcggcgactgggcg
cgaggctgcgagccccagcaggaccccgcgctgcgagggaagaaggacggagaggctagc
ttcaccatcaaagtgcctaggaggaatgtgggcccatcatcgacccagctgtacatggtt
cgcactcagctggaagccctgatctcggacaagtctggtggaagacggactctccgcaag
gacctggacgcgggcaccctcacgcagatagagatgttccacaggcagagcttctattgg
agctacctgctcaacttgtccgactccctgcagaagtgctgcgatctatcccagctgtgg
tacagagagttctatctcgagatgacgatgggaaggaaagttaataaatgcatggtacgc
catcaacacaacgaggagtgcaacgacctggtgaccatggagaagaggatccagttcccc
atcgagatgtccatgccctggatcctgactgatcacatcctgaggaccaaggagccggct
atgatggaatacgtcctctaccccctagatctatacaacgactccgcccaatacgcgctc
acggtcttccggaaacagttcctctatgatgaggtggaagcggaagtcaatctatgcttc
gatcagttcgtctataagctgtctgaacaagtctatgcgcattataagcagttggctgcc
agcatgttactagacaagcgttatcgagccgaatgcgcggccagaggcgcgagtaccggc
gcaggcgcggggcgctacgcgtccctgctgaggcagaggcacgtcgcgctgctgggcagg
catgtggacctgtgcgcgctggtggcacagcgtattaattcggacatgcatcgcgctctc
gacgcggcggtcgctaagttcgaagccggcgatataactggtgttgttgaacttgaaggt
ctgatctcggtcaaccgcctctgtcacaagctcctgagtcgttacctgactcttgacgat
ttcgatgctatactccgagagagcgaccacggtgtcctcgctccgtacggaaggatcact
ctgcacgttttctgggagttaaattttgattttttgccgaattattgctataacgctgct
acggatcggttcgtcaaatgccgcggcatccagttcggtgtgggcgtgtcccgggagaag
ccgcagcagtacggccacgcgctcctgtgggggtccaaacagctcagcctggcttactcc
gcgcaatacgcacagtatagtggtttcgtaggcgcccagcacctacacgccctggtccgc
ctgctgggctaccagggcgtagccgtcgtagtctcggagctactcgacgtagcgcgcgga
ctgctacacggtaccatagctcagttcacgcgcgcgctcgctgccgccatgcccaggcat
tgtaaactgccgagatacgattatgggtctaatggtgtcctaggctattaccacgctcag
ctgacagacatagtacagtacccggacgccaggacagaactcttccatgctttccgggaa
cttggaaacatcatactcttctgcatgctgatcgagcaggcgctcagtcaagaagaagtc
actgatcttcttcacgcggctcccttccagaacattctgccgcgacccttcgccgcagaa
ggtgaaaaaccggaatcgaagcagaaaagactggaagcgaagtacgcggcgctacagatt
gtgcaaaatgttgataaatatgggacagctaagcaaggccagttatctcgtgagggtgac
ctgttgacccgcgagcgcctctgttgtggcctctccttgttctctgtggtactccgccgt
ctgagaggctgcctctccgcgccgcagtggcccgcccccccgacccacactgatgatacc
aacgagttccacagactgtggtcggcgttacagttcctatactgtataccggttggggaa
acgcagtttactgtcgaggagttgttcggtgaaggcctccattgggccggctgtaccatc
atagccctgttaggccaacagaggcgttttgaggccttggacttctgctaccacatcctc
agggtccagcgagtcgacggcaaggacgaaatggtcaaggacattcctctcaaacgcatg
gtcgataggattcgtcgtttccaagtattgaactctcagatcttcggagtgctggcccgt
cacctagccgcggacgaggagagggcgggagtcgaacatgtgaggtgtttcccgccgcct
tcagccccgcaacacgctatgaattag
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