Thalassotalea nanhaiensis: RI845_01915
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Entry
RI845_01915 CDS
T10168
Symbol
uvrD
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
tnn Thalassotalea nanhaiensis
Pathway
tnn03420
Nucleotide excision repair
tnn03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
tnn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RI845_01915 (uvrD)
03430 Mismatch repair
RI845_01915 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
tnn03400
]
RI845_01915 (uvrD)
Enzymes [BR:
tnn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RI845_01915 (uvrD)
DNA repair and recombination proteins [BR:
tnn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RI845_01915 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
RI845_01915 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
Viral_helicase1
AAA_22
DUF5906
Motif
Other DBs
NCBI-ProteinID:
WNC68922
LinkDB
All DBs
Position
404086..406257
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AA seq
723 aa
AA seq
DB search
MDVSELLDSLNDKQRDAVAAPSKNMLVLAGAGSGKTRVLVHRIAWLVQVEQISPHSILSV
TFTNKAAAEMRGRVEQSIGGNIHGMWVGTFHGLAHRLLRMHFQEAKLPQTFQVLDSDDQL
RMIKRVVRSLQLDEKKWPAKQAMYYINGKKDEGLRPQHIDCQFDPTEQTFVKIYQTYQDT
CDRAGLVDFAELLLRAHELWLNNPILLEHYQQRFTRILVDEFQDTNAIQYAWLNMLGKKH
GNVMIVGDDDQSIYGWRGAKIENIQRFVKDFDAETIRLEQNYRSTANILNAANALITNNN
NRLGKDLWTEDDAGETISLYTAFNEIDEARFISGRIKQWLEDGNSLDDVALLYRSNAQSR
LLEEALLQARLPYRIYGGLRFFERQEIKDALAYLRLINNRNDDASFERIINTPTRGIGNK
ALTLIRDCARSQGSTLWDACLHMIEENELAGRSAKSIKAFVDLIVQLEDDSTNLNLDQQA
NHVIQHSGLKAMYQAEKGERAAARIENLNELVTACSTYEVDPEVEEELTPLTAFLTHASL
EAGESQADEYESAVQLMTLHSAKGLEFPLVFIVGMEEGMFPSQQSAEDIVRLEEERRLCY
VGMTRAMKKLYLTHAESRRLYGQEKYHRQSRFLKEIPDKFIDEIRMKNQVAKPKTTGRFS
NTITMETFENTGFKLGQRVMHQKFGEGVVLNFEGTGAQSRVQVNFSEHGSKWLVVAYARL
EAV
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggatgtttctgaattactcgattctttaaatgataaacagcgtgatgctgttgccgct
ccttctaaaaatatgttggttttggctggcgctggctcaggtaaaacacgagtgttggta
catcgcattgcctggcttgtacaagtagagcaaatatctccgcacagtatattgtcggta
actttcaccaataaagcggcagcagaaatgcgtggccgggttgaacaatctataggcggt
aatatacacggcatgtgggttggcaccttccatggcttagctcaccgcttgttgcgtatg
cattttcaagaagcaaaattgccacagacattccaagtactcgattctgatgatcaatta
cgaatgattaaacgtgtcgttcgttcactgcaacttgatgagaaaaaatggcctgccaag
caagcaatgtactatatcaatggtaaaaaagatgaaggcctaagaccgcagcacatagat
tgtcagtttgacccgaccgaacaaacgttcgttaaaatttatcaaacttatcaagatact
tgtgatcgagcaggcttggtcgattttgccgagttattattgcgggcgcatgagctttgg
ttaaataatcctattttattagagcattatcagcaacgttttacccgtatcttagtggac
gagtttcaagataccaatgctatccaatacgcttggctaaatatgcttggtaaaaagcat
ggcaatgtgatgattgttggtgatgatgatcagtctatttatggttggcgtggcgcaaaa
attgaaaacattcaacgttttgtaaaagacttcgatgccgaaacaattcgtttagaacaa
aactaccgttctacagcgaatatccttaatgctgccaatgctttgattaccaataataat
aatcgcttaggcaaggatttatggacagaagatgatgctggcgaaactatttcattgtat
accgcatttaatgaaattgacgaagcaaggttcatttcaggacgtataaaacagtggctt
gaagacggcaattcgttagatgatgttgcgttattatatcgctcaaatgcgcaatcacgt
ttgctggaagaagcattattgcaagctcgcttaccatatcgtatttatggtgggttgcgc
ttcttcgaacgtcaggaaattaaagatgcattagcgtatttacgcctgattaataaccgc
aatgacgatgcgtcatttgaacgaattattaatacgccaacacgtggcataggtaataaa
gcgttaaccctcattagagattgtgctcgtagccaaggttctacattgtgggatgcgtgt
ttgcatatgattgaagaaaatgaattagccggacgtagcgctaaatcaataaaggcattt
gtcgatttaattgtacaacttgaagatgattcaactaatttaaaccttgatcaacaagcc
aaccacgtcattcagcacagtggtttaaaagccatgtaccaagctgaaaagggtgaacgc
gcagcagcaagaattgaaaacttaaatgaattagtcaccgcatgttctacctatgaagta
gacccggaagttgaagaagaactaacgccgttaacggcatttttaactcatgcttcactt
gaagcaggcgaatcgcaagctgacgagtacgagtctgcggtacagcttatgacgttgcac
tctgcaaaaggtctagaatttccattagtgtttattgtcgggatggaagagggcatgttc
ccttctcagcaatctgctgaagatattgttcgtttagaagaagagcgtcgcctttgttac
gttggcatgaccagagcaatgaaaaaactgtatttaacccatgctgaatcgcgcaggtta
tatggccaagaaaagtatcatcgtcaaagtcgtttcttaaaagaaatcccagacaagttc
attgacgaaatacgaatgaaaaaccaagtcgctaagcctaaaacgactggtcgttttagt
aataccattaccatggaaacctttgagaatactggctttaaattaggtcagcgagtaatg
catcaaaagtttggtgaaggtgtggtacttaactttgagggcactggcgcacaatcccgt
gtgcaggttaactttagcgaacatggtagtaaatggctggtggttgcttatgcaagactt
gaggccgtatag
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