Thalassotalea nanhaiensis: RI845_01970
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Entry
RI845_01970 CDS
T10168
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
tnn Thalassotalea nanhaiensis
Pathway
tnn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
tnn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RI845_01970 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tnn03019
]
RI845_01970 (recQ)
03400 DNA repair and recombination proteins [BR:
tnn03400
]
RI845_01970 (recQ)
Enzymes [BR:
tnn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RI845_01970 (recQ)
Messenger RNA biogenesis [BR:
tnn03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
RI845_01970 (recQ)
DNA repair and recombination proteins [BR:
tnn03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RI845_01970 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
WNC68933
LinkDB
All DBs
Position
426659..428470
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AA seq
603 aa
AA seq
DB search
MKTDANTEQQLPDLHHSLNHHFGYQSFRSGQQQVIEQLLQGRDCLVLMPTGGGKSLCYQL
PATIMSGLTIVVSPLIALMKDQVDGLSRQGISAAYINSSLDGQTINQTMQKIANGEIKIL
YVAPERLLNHYFLQSIQQVQISFFAIDEAHCISSWGHDFRPSYTQLGKLKEYFPYTPVIA
LTATADVTTRKDILNQLQLTNPYVLLDSFDRPNIRYTLADKYNGETQLLEYLKEMGDESG
IIYCNSRWQVDKLSGFLASKGYNCAGYHAGMETEIRGVIQDGFTKDNIKIVVATVAFGLG
INKPNVRFVVHFDMPRTLESYYQETGRAGRDGLKAEALFLYDSQDIERIKKRISQNENEQ
RINVELQRFAAMSGFAEAQTCRRQVLLNYFAEYTNNGCGNCDICLDPPSRYDATVDAQKV
LSCVFRINQSGDIHHVIDVLRGRELDKIVQKEHDKVSTFGIGKDKTRGYWFSVIRQLIHL
GFLQQDIEQQSALCLTNASKAALKGTEPLMMARPRLQSQGYWQQNKATSAYDKVLFKQLR
TLRKDIADSEDIAPFIVFNDASLIEMARLKPRNSTEFLAITGVGDTKLARYGKAFIDLIK
EQS
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaactgacgctaacaccgaacaacaattacctgacttgcatcattctttgaatcat
cattttggctatcaaagctttcgctctggccagcagcaagttattgagcaattattgcaa
ggtagagattgcttggtattaatgcccaccggtggtggtaaatctttatgttatcaattg
cctgcaaccataatgtcagggttaaccattgttgtgtcaccattaatcgctttaatgaaa
gaccaggtagatggcttaagtcgacaggggatttctgcggcctatattaattcaagttta
gacgggcaaactatcaatcaaaccatgcaaaagattgccaatggtgagatcaaaatattg
tacgtggcgcctgagcgtttattaaatcattattttttgcaaagcattcaacaagtacaa
atcagtttttttgccatcgatgaagcccattgtatttcttcatgggggcatgactttagg
ccatcatatactcaacttggcaagctgaaagaatactttccttacacgccggttattgct
ttaacagcaaccgcagatgttactacacgcaaagatatattaaatcagctgcaactaact
aacccgtacgtgctgcttgatagtttcgatcgacctaatatccgctataccttagcagat
aaatacaatggtgaaacacagttgcttgaatacctgaaagaaatgggcgatgaaagcggt
attatttattgtaatagtcgctggcaagtagataaattaagtggctttttagcctctaaa
ggatataactgtgccggttatcatgccggtatggaaactgaaatccgtggtgttattcaa
gacggtttcactaaagataatatcaagattgttgtagctactgtggcgtttggtttaggt
ataaataagcccaatgtgcgttttgtggtgcactttgatatgccaagaaccttggaatct
tattatcaagaaactggccgagcaggtcgtgacggattaaaagcagaggcgctgttttta
tacgatagccaagatattgaacgaataaagaaacgcatttcgcaaaatgaaaatgaacag
cgtattaatgttgaattacaacgttttgccgcgatgtcaggttttgctgaagcacaaacc
tgtagaaggcaagtgctgctaaattactttgccgaatacaccaataatggctgtggtaac
tgtgatatctgtttagacccaccgagtcgatatgatgcgacagttgatgcccaaaaagta
ttatcttgtgtgtttagaataaatcaaagcggtgatatacatcatgttattgatgtgctt
cgaggacgagagctcgataaaattgtccaaaaagaacacgataaggtaagtacctttggt
attggtaaagataaaactcgtggttattggttttcagtaattagacaattaatacattta
ggttttttacaacaagatatcgaacagcaatcagccctgtgtttaaccaatgcttccaag
gcggcacttaaaggtactgagcctttaatgatggcaagaccaaggttacaaagccaaggc
tactggcaacaaaataaagcaacgtcggcttacgataaagttttattcaaacaacttcgt
acattgcgcaaagatattgctgatagtgaagatattgcaccgtttattgtatttaacgat
gcatcactaattgaaatggcccgtttaaaaccaagaaattcgaccgagtttttggcgata
accggtgtgggtgatacgaaactcgcacgctatggcaaagcgtttatcgacttgataaaa
gagcaatcttag
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