Thalassotalea nanhaiensis: RI845_04590
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Entry
RI845_04590 CDS
T10168
Symbol
truD
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
tnn Thalassotalea nanhaiensis
Brite
KEGG Orthology (KO) [BR:
tnn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tnn03016
]
RI845_04590 (truD)
Enzymes [BR:
tnn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
RI845_04590 (truD)
Transfer RNA biogenesis [BR:
tnn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RI845_04590 (truD)
Prokaryotic type
RI845_04590 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
WNC69432
LinkDB
All DBs
Position
1008376..1009422
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AA seq
348 aa
AA seq
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MDNAVAELAYLYGKPNSHGELRRSVSDFKVDEILPFTFSGEGEHLIIHIRKTGANTLFVA
RQLAKYFKVKDALVSYAGLKDRNAVTKQYFGVHLPGKTQYDLSDLNIKGVEVLSYQRHNK
KLKTGALIGNHFELMLRNVDDIEDVKDRWQKILSLGVPNYFGEQRFGQQGNNLTAATELF
NGKKVKDKKKRGFYLSAARSFLFNEFISERIKNKHFSTAINGDVYMLSGSRSIFSQDEVD
ETITKRLAEKDISITAPLWGAGELATSSQARELEQDLASNYEEFCKGLAKFGLKQERRSI
SLFLESGQLEVLENDIKLSFFLPAGCFATTILRELLLYTDMSQSRVEQ
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atggataatgcagtagcagaacttgcttatttgtatggtaaaccgaacagccatggcgaa
ttacgacgatctgtaagtgactttaaagtcgatgaaatactaccttttacctttagcggt
gaaggtgagcatttaattattcacattcgcaaaaccggcgctaataccttatttgttgcc
cgccaattggctaaatactttaaagtaaaagatgcattagtgtcttacgcaggtttgaaa
gataggaatgcggtaaccaagcaatattttggtgtacatttacctgggaaaactcaatac
gatcttagcgatttaaatattaaaggcgtcgaagttttatcttatcagcgacataataaa
aaattgaagactggcgccttgataggtaaccactttgaattgatgctgcgaaacgttgat
gacattgaagatgttaaagacaggtggcaaaaaattctatcattaggggtaccgaattat
tttggcgaacagcgctttggtcagcaaggtaataacttaaccgcagcaactgaattgttt
aatggtaaaaaggtaaaagataagaaaaagcgtggtttttatttatcggcggcgcggtct
tttctgtttaatgaatttatcagtgaacgcatcaaaaacaaacatttctctaccgcgata
aatggtgatgtgtatatgttgagtggctcccgttctatattttctcaagatgaagttgat
gaaacgataacaaaacgcttagctgaaaaagatataagcattactgcacctctatgggga
gcaggagagttggcgacctctagtcaggctcgagagcttgagcaagacttagccagtaac
tatgaagaattttgcaaggggctggcgaagtttggcttgaaacaagaacgtcgaagtatc
agtttgtttttagagtctggtcaattagaggttttagaaaatgatattaaattgtcattc
tttttacctgcaggctgttttgcaacaacaattttacgagagttattgctttataccgat
atgtctcaaagccgtgttgaacagtaa
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