Thalassotalea nanhaiensis: RI845_04870
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Entry
RI845_04870 CDS
T10168
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
tnn Thalassotalea nanhaiensis
Pathway
tnn02024
Quorum sensing
tnn03060
Protein export
tnn03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
tnn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
RI845_04870 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
RI845_04870 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
RI845_04870 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
tnn02044
]
RI845_04870 (ffh)
Enzymes [BR:
tnn01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
RI845_04870 (ffh)
Secretion system [BR:
tnn02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
RI845_04870 (ffh)
Eukaryotic Sec-SRP protein
RI845_04870 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
CbiA
AAA_22
Zeta_toxin
cobW
AAA_31
Peptidase_C23
YqeC
AAA_33
KTI12
AAA_26
T2SSE
FliD_C
AAA_30
AAA_16
AAA_14
APS_kinase
SLFN-g3_helicase
AAA_24
AAA_19
ABC_tran
ArsA_ATPase
TsaE
Thymidylate_kin
Rad17
Mg_chelatase
AAA_17
ATP_bind_1
AAA_28
Motif
Other DBs
NCBI-ProteinID:
WNC69480
UniProt:
A0ABY9TL92
LinkDB
All DBs
Position
1065035..1066438
Genome browser
AA seq
467 aa
AA seq
DB search
MFENLSDRLSKTLKNISGRGRLTEDNIKDTLREVRMALLEADVALPVIREFIANVKERAV
GQEVSKSLSPGQIFVKIVRTELESAMGQANEALDLKATPPAIILMAGLQGAGKTTSVAKL
AKFLKEREKKKVLVVSADVYRPAAIKQLETLAGEVDVEFFPSDISQKPTAIANSAIDHAK
KQFCDVVIVDTAGRLHVDGEMMDEIKQLHSNINPVETLFVVDAMTGQDAANTAKAFNDAL
PLTGVILTKTDGDARGGAALSIRHITGKPIKFMGVGEKTDALEPFHPDRVASRILGMGDV
LSLIEEVEQKVDKKKAEQLAKKVKSGKGFSLEDFRDQLVQMKSMGGMMGMMDKLPGMGNM
SEQVKGQMDDKVTIRMEAIINSMTPGERERPDIIKGSRKRRIAAGSGTQIQDVNKLLKQF
TQMQKMMKKMSGKGGMKKMMRSMQGMMPPGGMGGMGGMGGPGGMFRK
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgtttgagaatctctccgatcgtttatccaaaaccctgaagaatatcagtggtcgtggt
cgtcttaccgaagacaacattaaagacaccttgcgcgaagtgcgtatggctctattagaa
gccgacgtagctttaccggttattcgtgaatttatcgccaatgtaaaagaaagagctgtt
ggccaagaagtttcgaaaagtttatctccagggcaaattttcgtaaaaatagttcgtact
gaacttgaatcggcaatgggtcaagctaatgaagcgctagacttaaaagcaacgcctccg
gcaattatcttaatggcgggtttacaaggtgcgggtaaaacgacctctgttgccaaatta
gctaaattcttaaaagaacgcgaaaagaaaaaagtcttagtggtgagcgccgatgtttat
cgtcctgccgccattaaacagcttgaaacattagccggcgaagttgatgttgagtttttc
ccaagtgatatttctcaaaaacctacggctattgctaatagcgcaatagatcatgcaaag
aaacagttttgtgatgtggtgattgttgatactgcgggtcgtttacacgtagacggcgag
atgatggatgaaattaaacaattacattccaacatcaacccagtagaaacgttatttgtc
gttgatgccatgactggtcaagatgctgccaacacggcaaaagcatttaacgacgcttta
ccattaaccggtgttatcttaaccaagaccgatggtgatgctcgtggtggtgcggcgcta
tcaattcgtcacattactggtaagccaattaagtttatgggggttggtgaaaaaactgac
gccttagaaccgtttcacccagatcgtgtagcgtctcgaattcttggaatgggtgatgtg
ttatcacttattgaagaagttgagcaaaaagttgataagaaaaaagcggaacagttagct
aaaaaagttaaaagtggtaaagggttcagcttagaagattttcgtgatcaacttgtgcaa
atgaaaagcatgggtggcatgatgggcatgatggataaattaccgggtatgggtaatatg
tctgagcaagttaaaggtcaaatggatgataaagttaccatacgcatggaagctatcatc
aattcgatgacaccaggtgaacgtgaacgccctgatattattaaaggctcacgtaaacgt
agaattgctgccggttcaggaacacaaattcaagatgtgaataagttgcttaagcaattt
acccaaatgcaaaaaatgatgaaaaaaatgtctggcaaaggcggcatgaaaaaaatgatg
cgctcaatgcaaggcatgatgccaccaggtggaatgggcggcatgggtggtatgggcggc
cctggcggtatgttccgcaagtaa
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