Thalassotalea nanhaiensis: RI845_06105
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Entry
RI845_06105 CDS
T10168
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
tnn Thalassotalea nanhaiensis
Pathway
tnn02020
Two-component system
tnn02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
tnn00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RI845_06105
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
RI845_06105
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
tnn02022
]
RI845_06105
02035 Bacterial motility proteins [BR:
tnn02035
]
RI845_06105
Two-component system [BR:
tnn02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
RI845_06105
Bacterial motility proteins [BR:
tnn02035
]
Flagellar system
Flagellar assembly proteins
Others
RI845_06105
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
AAA_2
HTH_30
AAA_5
HTH_20
MerR
HTH_24
HTH_23
Sigma70_r4_2
AAA_16
HTH_28
HTH_11
AAA
AAA_7
FleQ
DUF2089
HTH_Tnp_ISL3
NB-ARC
HVO_A0261_N
AAA_3
HTH_17
HTH_10
Motif
Other DBs
NCBI-ProteinID:
WNC69716
UniProt:
A0ABY9TLV6
LinkDB
All DBs
Position
1370369..1371700
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AA seq
443 aa
AA seq
DB search
MTSKVVLVVEDDPGLREAVVDTLHLSEFDCIEADSGEAALVLLKQHKVDIVVSDVQMGAM
SGLALLKNIKTGWPNLPVLIMTAYATIDDAVQAMKDGACNYIAKPFAPEVLINMISQYMP
VEKVVSSRPIAVDKQSIQLLGLAEKVASTDASVMILGPSGSGKEVLSKFIHNNSNRADNT
FVAINCAAIPENMLEATLFGYEKGAFTGAVNACPGKFEQAQGGTILLDEITEMDLGLQAK
ILRVIQEREVERLGSRKVINLDVRVLATSNRDLKQAVSEGVFREDLFYRLNVFPLTWPPL
CKRPEDILPLAHHILQQFSQNEQVSLTAAAEIKIVSHQWPGNVRELENVIQRALIMKTGA
DIDSDDLLIEDFVEAKSEDVYIASQEEENLESELKQQEFQIILDALRACDGSRKEVAERL
GISARTLRYKLAKMRESGIELPV
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgaccagtaaagtggtcctagtcgtcgaagatgatcctggtttacgcgaagccgtagtc
gataccttacacctttcagaatttgactgtattgaagcagattctggcgaggcagcattg
gtgctgttgaaacaacacaaggttgatattgttgtttcagacgtacagatgggggccatg
agtggtcttgccctgttaaaaaatattaaaactggttggccaaacttacctgtactgatc
atgacggcttacgcaactattgatgatgcagtgcaagcaatgaaagatggtgcttgtaat
tatattgctaaaccttttgcgccagaagtattgatcaatatgatcagccaatatatgccc
gttgagaaagtggttagctctcgtccaatcgctgtcgataaacaaagcattcagttgctt
ggtttggctgaaaaagtcgccagtacagacgcttctgtgatgatccttggccccagcggt
tcaggtaaagaagttctctctaagtttattcataacaactctaatcgagctgataatacc
tttgttgctattaattgcgctgctattcctgaaaacatgcttgaagctactctgtttggc
tatgagaagggcgcttttaccggagctgttaatgcttgcccaggtaagtttgagcaagct
caaggcggtactatcttattagatgaaattactgagatggatttaggtctgcaagcaaaa
atcttgcgagttattcaagagcgagaagtagagcgtttaggctcaagaaaggtaattaac
ttagatgtgcgcgtacttgcaacaagtaaccgagatttaaaacaggccgtaagcgaaggt
gtatttcgagaagatttattttatcgcttaaatgttttcccattaacttggccaccattg
tgtaaaagacctgaagatatcctaccgttagctcatcatatacttcagcaatttagtcaa
aatgaacaggtaagcctaacagctgctgccgaaattaaaatagtaagccatcaatggcct
ggtaatgttcgagaattagagaacgtaattcagcgagcccttatcatgaaaactggtgcc
gatattgatagcgatgacttacttattgaagattttgttgaagcaaaaagtgaagatgtt
tacatcgctagccaagaagaagaaaatcttgaaagtgaattaaaacagcaagagtttcaa
attattttagatgcgcttcgagcttgcgatggttcacgtaaagaagttgctgaacgttta
ggaataagcgccagaacattacgttataaattagcaaaaatgcgcgaaagcggtatagag
cttcctgtttag
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