Thalassotalea nanhaiensis: RI845_07515
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Entry
RI845_07515 CDS
T10168
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
tnn Thalassotalea nanhaiensis
Brite
KEGG Orthology (KO) [BR:
tnn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tnn03016
]
RI845_07515 (truB)
Enzymes [BR:
tnn01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
RI845_07515 (truB)
Transfer RNA biogenesis [BR:
tnn03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RI845_07515 (truB)
Prokaryotic type
RI845_07515 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
WNC69976
UniProt:
A0ABY9TM65
LinkDB
All DBs
Position
1700713..1701654
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AA seq
313 aa
AA seq
DB search
MAKRRKGRQIDGVLLLDKPYEMSSNSALQATKRIYFANKAGHTGALDPLATGMLPICFGE
GTKFSQFLLDIDKTYIVTAKLGIRTTTSDADGEIVAEKPVNVTDAELLPALDSFRGDSKQ
VPSMYSALKHKGQPLYKYAREGITIEREARDITVFRLDLLRFEGDEVDLEIHVSKGTYIR
TIIDDLGELLGCGAHVSMLRRTAVGNYPIDKMVTMEHLETLLNDAKEQGISPSEVLDPLL
LPMDSAVYILDSVTVDDESARYLRFGNPVSIKSAPATDTLLKVYVGDEQEFIGVGIINDD
GMLAPKRIVVDHQ
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atggctaagcgcagaaaaggtcgtcaaattgacggcgttttgttacttgataagccttat
gaaatgtcttcaaattcagcactacaagcaacaaaacgtatttattttgctaataaagca
ggccataccggtgcactagatccattagccacaggtatgttgccaatttgttttggcgaa
ggaactaagttttctcagtttttattggatattgataaaacttatattgttactgccaag
cttggtattcgcacaaccaccagcgatgccgatggagaaattgttgccgaaaaaccggta
aatgtaactgatgcggagctattgcctgcgttagactcatttcgtggtgattctaaacaa
gtaccatcaatgtattcagcgttgaaacataaaggtcagcctttatataagtatgcgcga
gaaggcattaccattgagcgtgaagcacgagatataactgtatttcgtttagatctactt
cgctttgaaggtgatgaagttgatttagaaattcatgtatcaaagggcacctatattcgc
actatcattgatgacttgggtgagttattaggttgtggtgctcatgtgagcatgttacgc
cgtacggctgttggtaattacccaatagataaaatggtcacgatggagcatttagaaacg
ctgcttaacgatgctaaagaacaaggcattagcccatctgaagtgttagacccgttacta
ttaccaatggactctgcagtgtacatacttgattcggtaactgtggatgatgaatcagct
cgctacttacgctttggaaatcctgtatcgataaaatcggccccggcaacagatacttta
ttaaaagtctatgttggtgatgagcaagagtttattggcgtaggtattatcaatgatgat
ggtatgttagcgcctaaacgcattgttgttgaccatcaataa
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