Thalassotalea nanhaiensis: RI845_07610
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Entry
RI845_07610 CDS
T10168
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
tnn Thalassotalea nanhaiensis
Brite
KEGG Orthology (KO) [BR:
tnn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tnn03009
]
RI845_07610 (dbpA)
Enzymes [BR:
tnn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
RI845_07610 (dbpA)
Ribosome biogenesis [BR:
tnn03009
]
Prokaryotic type
rRNA helicases
RI845_07610 (dbpA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
Cas3-like_C_2
AAA_19
AAA_30
Motif
Other DBs
NCBI-ProteinID:
WNC69994
LinkDB
All DBs
Position
1721909..1723294
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AA seq
461 aa
AA seq
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MSQSKFSTLALKPELLTNIESLGYESMTPIQEQSLPDIIAGKDVIGQGKTGSGKTAAFGL
GLLQKLDVKRFRIQSLVLCPTRELADQVAKELRKLARSIHNIKILTLCGGTPFGPQIGSL
EHGAHIIVGTPGRVEEHVIKGTLNLENLNLLILDEADRMLDMGFQPALDNIVRHSPKYRQ
TLLFSATFPNKIKQISERIMTLPTMVKVESTHDDSSISQHFYHVQDNEERLQALQLLLLE
NKPESCVVFCNTKKDAQLVADELVSFGFSTLALHGDLDQRDRDQTLVRFANKSANVLVAT
DVAARGLDIDNLDMVVNYHIALDTEVHVHRIGRTGRAGSKGLACSLYSDKESYKVALLED
YLDQKITGEQLPHINALNALPLRPDMITIQISGGKRDKVRPGDILGALTGDKGIKGDQVG
KINVAQNFAYVAVKRNAHKVALKKLEDGKIKGRNFRIRVIR
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
ttgagccaatctaaattttctaccctagcattaaaaccagaattattaaccaatatagaa
tcattgggttatgaatctatgacgcctattcaagagcagagtttaccagatatcattgcc
ggtaaagatgttattggccaaggtaaaaccggttcaggaaaaacggcggcatttggctta
ggtttattacaaaaacttgatgttaaacgattccgtatccaatctttagtgttgtgtcca
actcgagagttggctgatcaggttgccaaagagttacgtaaattggcacgttctattcat
aatattaagatattaaccctatgtggtggtacaccatttgggccacaaataggctcactt
gaacatggcgctcatattattgttggtacgccagggcgcgttgaagaacatgtaattaaa
ggtacattaaacttagagaacttaaacctattaattcttgatgaagctgatcgtatgctt
gatatggggttccaaccagcgttagacaatattgttcgtcattcgcctaaataccgacaa
acattattattcagtgctacatttccaaataaaataaagcaaatctcagagcggatcatg
accttaccaacaatggttaaggttgaatctactcatgatgacagcagtatttctcaacat
ttttatcatgtacaagacaatgaagagcgcctgcaagcattacagctgttattgctggag
aataaaccagaatcttgtgtcgtgttttgtaataccaaaaaggatgcacagttagtcgct
gatgaattagtgtctttcggttttagtacactggcattacacggtgatttagatcagcgt
gatagagatcaaaccttggttcgctttgccaacaaaagcgccaatgttcttgtcgcgaca
gatgttgctgcgcgaggtttagatattgataatctggatatggtagtaaattatcatatt
gctttagatacagaagtacacgtacatcgaataggccgtactggtcgtgcaggcagtaaa
ggtttagcttgttcattatatagcgataaagaaagctataaggttgccttattagaagat
tacctagatcaaaaaatcacaggtgagcaattgccgcatatcaatgcgctgaatgcgttg
cctttacgtcctgatatgatcacaattcaaatcagtggtggtaagcgtgacaaagttcgc
ccaggtgatattttaggggcgttaacgggtgataaaggcataaaaggtgaccaagtcggg
aaaattaatgtcgcacaaaattttgcttatgtagcggttaaacgcaatgcgcataaagtt
gcattgaaaaaattagaagatggaaaaattaaaggtcgtaactttagaattcgagtaata
cgatag
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