Thalassotalea nanhaiensis: RI845_11900
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Entry
RI845_11900 CDS
T10168
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
tnn Thalassotalea nanhaiensis
Pathway
tnn03030
DNA replication
tnn03430
Mismatch repair
tnn03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tnn00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RI845_11900 (dnaE)
03430 Mismatch repair
RI845_11900 (dnaE)
03440 Homologous recombination
RI845_11900 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tnn03032
]
RI845_11900 (dnaE)
03400 DNA repair and recombination proteins [BR:
tnn03400
]
RI845_11900 (dnaE)
Enzymes [BR:
tnn01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RI845_11900 (dnaE)
DNA replication proteins [BR:
tnn03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RI845_11900 (dnaE)
DNA repair and recombination proteins [BR:
tnn03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RI845_11900 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
WNC67220
LinkDB
All DBs
Position
complement(2734927..2738406)
Genome browser
AA seq
1159 aa
AA seq
DB search
MNDPKFVHLRVHSDFSMSDGLNKVKPIIAKAAELNMPALALTDQTNLCGLVKYYHAAHGA
GMKPIIGTDFWVQSDELEDELFRLVVIATDNKGYKNLTELISKAYLRGHIQGRAALDKQW
LVEYSEGLILLSGGREGDIGKALLKNNVELVEQMVSFYQQYFADRFYLELIRTGREDEET
YLHLAVELAQQTHLPVVATNEVVFLSSDLFDAHEIRVAIHDGFTLDDKRRPKKYSPEQYL
RSEQEMVELFSDIPEALANSVEIAKRCNVTVTLGEYVLPDFPTEGLPIEDFLVKVSEEGL
QERLEFLFDKDSPEFEELRKPYDERLKIELEVINNMGFPGYFLIVMEFIQWSKDNNIPVG
PGRGSGAGSLVAYAQKITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMDRRDEVIDHTA
ELYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLIPPTPGMTLDKAFEEEP
KLPEVYAQDNEVKDLIDMCRILEGTTRNAGKHAGGVVISPTTITDFAPLYCDDEGNNPVT
QFDKNDVEDAGLVKFDFLGLRTLTILQWAIEIADEKLLKLGKEPIDIAAIPLDDKASFNM
LLASKTTAVFQLESSGMKSLIEKLKPDCFEDIIALVALFRPGPLDSGMVDNFIERKHGRE
EVSYPDAQWQHESLKEILEPTYGIILYQEQVMQIAQVLAGYSLGGADMLRRAMGKKKPEE
MAKQRSTFEKGAIDNGVDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWMKAHFP
APFMAAVMSADMDNTEKIVTLVDECSNMELTLLPPDVNSGLYKFTVNENNEIVYGIGAVK
GVGEGPVEAIIAAREEGGPFIDLFDFCARLDLKKTNKRVLERLIKSGAMDNLGPHRAAMF
ASLPEAIKAADQHAKAQAIGQDDLFGLINVEEEDERQSFKEVTPWAEEVWLDGERETLGL
YLTGHPIDRYLDEIKKYGSTRLVNLQPGAKDKISTATGLVLGVRVLVNKRNRRWALVTLD
DKSARIDVRLFPDDYERFEEILQKDEILVCKGQVSFDDYSGGLTMTAREVMTVSEARENN
IKSIDLNVLRNQLTPQFITDFTEVLTPYKEGTCPVRMFYQRDEAKATIELGTQWRVSPDD
TLMHELKVLLGDENISLEF
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaccctaaatttgtccatttaagagtacacagtgacttttcaatgtctgatggt
ttaaacaaagttaaacctatcattgcaaaagctgctgaattgaacatgccagcgctagca
ttgaccgaccaaactaatttatgtggtctggttaaatattaccatgcagcccatggcgcc
ggtatgaagccgattattggtacagatttttgggtgcaaagtgacgaacttgaagatgag
ctttttcgtttagttgttatagccacagataacaaaggttataaaaaccttactgaactt
atctctaaagcttatttacgtggccatattcaaggtcgcgctgctctggataaacaatgg
cttgtagaatatagcgaagggcttattttactctctggtggtcgtgaaggtgacataggt
aaagcactattaaaaaataatgttgaacttgttgagcaaatggtgagcttttatcagcaa
tactttgcagatagattctatctcgaactaatacgtacgggtagagaagatgaagaaaca
tacctgcacttagctgttgaacttgcacagcaaacacaccttcctgtagtcgcgactaat
gaagttgttttcttatcttcagacttgtttgacgcacatgagatccgtgtggcgatccat
gatggatttaccctagatgataaaagacgtcctaagaagtatagccctgagcaatatttg
cgcagtgaacaagagatggtcgaattgtttagcgatattccagaggctctggctaactca
gttgaaatagcaaaacgctgcaatgttaccgttaccttaggtgagtatgttttaccagac
tttccaactgaaggcctaccaattgaagacttcttggttaaagtgtctgaagaaggcttg
caagaacgcttagagtttctttttgataaagactcgcctgaatttgaagaattacgtaag
ccgtatgacgaacgtttaaaaattgagcttgaagtaattaataacatgggtttccctggt
tatttccttatcgttatggaatttattcaatggagtaaagataataatatacctgtaggc
ccaggacgtggttcaggtgctggttcattagtggcttatgcacaaaaaatcacagatctt
gatccgctagaatatgatttacttttcgagcgatttcttaaccctgaacgtgtttcaatg
cctgactttgacgtcgatttctgtatggatagacgagatgaagtaattgatcataccgca
gagttgtatggtcgagatgcggtatcacaaattatcacttttggtactatggcggcgaaa
gcggttatacgtgatgttggtcgtgttcttgggcacccttatggctttgttgacagaatt
tcaaaactgatcccgccgacaccaggcatgaccttagataaagccttcgaagaagagcct
aaattaccagaggtctacgcgcaagataatgaggttaaagaccttatcgatatgtgtcgt
attcttgaaggaactacacgaaatgccggtaaacatgccggtggtgttgttatttcgccg
acaacgatcactgactttgctccgctttattgtgatgatgaaggcaataacccggttact
caattcgataagaatgatgttgaagatgcaggcttagttaagtttgatttcttaggttta
cgtaccttaactattttgcaatgggctattgaaatagccgatgaaaaattgcttaagtta
ggtaaagaaccaatcgatattgccgcgataccattagatgataaagcatcatttaatatg
ttgcttgcttcgaaaaccactgcggtattccagctagaatcatcgggcatgaagtcactg
attgaaaagctaaaaccagattgctttgaagatataatcgcattggtggccttattcaga
ccaggtccacttgattcaggcatggttgataactttatcgagcgtaagcatggccgtgaa
gaagtttcatacccagatgcacaatggcagcatgaatcattaaaagaaattcttgaacct
acctacgggataattttataccaagagcaggtaatgcaaattgcccaggtacttgcgggt
tactcactaggtggcgctgatatgttacgtcgtgccatgggtaagaaaaagcctgaagaa
atggcaaaacagcgttcaacctttgaaaaaggagcaattgataacggtgttgatggcgag
ctggcgatgaaaatcttcgatttagtagagaagttcgctggttatggttttaacaaatct
cactctgcagcctacgcgctcgtttcatatcaaacattatggatgaaggcgcattttcca
gcaccgtttatggcggctgtaatgtcggcagatatggataacacagagaaaatcgttacc
cttgtagatgagtgtagcaatatggaattaacgctacttcctccggacgttaattctggt
ttatataaatttaccgttaatgaaaacaatgaaattgtttatggcataggtgcggtaaaa
ggtgttggtgaaggccctgttgaagcaattatagcagccagagaagagggcggtcctttc
attgatttgtttgatttttgtgcgcgcttggatttaaagaaaaccaacaaacgcgtgctc
gagcgattaattaaatctggggctatggataacttaggtcctcatcgcgcagcgatgttt
gcatcattacccgaagcgattaaagcggccgatcaacatgctaaagctcaagctattggt
caagatgatttatttggtttaataaacgttgaagaagaagatgaacgtcaaagctttaaa
gaggtcactccttgggctgaagaagtatggcttgacggagagcgcgaaactctcggttta
tatttaacgggtcatccgattgaccgttatttggatgaaattaaaaagtatggctctacc
cgcttagttaatttgcagcccggagcgaaagataaaatatcgacagcgacaggtttagtg
cttggtgtgcgagtattggtaaataaaaggaaccgacgttgggcacttgtgactttagac
gataaaagtgctcgtattgatgtgcgattattcccagacgactatgagcgctttgaagaa
atcctacaaaaagatgaaattttagtctgtaaaggacaggtcagctttgatgattactcc
ggagggcttacaatgaccgcccgtgaagtaatgacggttagcgaagctcgcgaaaataac
attaaatctatagatttaaatgtgttacgaaatcagctaaccccacagtttattactgac
tttacggaggttcttacaccctacaaggaaggcacctgcccagttagaatgttttaccaa
cgcgatgaagcgaaagcgactatcgaattaggtacgcaatggcgagtgtctccggacgat
acactaatgcacgaattaaaagtgttattgggtgacgaaaatatttcgttagaattttaa
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