Thalassotalea nanhaiensis: RI845_13390
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Entry
RI845_13390 CDS
T10168
Name
(GenBank) AMP-binding protein
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
tnn Thalassotalea nanhaiensis
Pathway
tnn00061
Fatty acid biosynthesis
tnn00071
Fatty acid degradation
tnn01100
Metabolic pathways
tnn01212
Fatty acid metabolism
tnn02024
Quorum sensing
tnn04146
Peroxisome
Module
tnn_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
tnn00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RI845_13390
00071 Fatty acid degradation
RI845_13390
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RI845_13390
09145 Cellular community - prokaryotes
02024 Quorum sensing
RI845_13390
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
tnn01004
]
RI845_13390
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tnn04147
]
RI845_13390
Enzymes [BR:
tnn01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RI845_13390
Lipid biosynthesis proteins [BR:
tnn01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
RI845_13390
Exosome [BR:
tnn04147
]
Exosomal proteins
Exosomal proteins of breast milk
RI845_13390
Exosomal proteins of breast cancer cells
RI845_13390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
AMP-binding_C_3
DUF2492
AMP-binding_C_2
Motif
Other DBs
NCBI-ProteinID:
WNC67507
LinkDB
All DBs
Position
complement(3101688..3103514)
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AA seq
608 aa
AA seq
DB search
MTKKFDLYRTFKMSIGLLEKGEIMKTALLVDRLEQYSQAEFKVDVAATLQAKANEYSTQV
ALSGHLLGGEINVEDQFTYAELSEEVKQFSKLLLAKGVRRSDRIALLSEARPHWAIAFLA
ILSCGAIVVPVDPQLTEVELLLILNDAKPKALIASTHMFTTGVTLQKQLNTINFVIELEC
YKAHLTTLESSVTSFSKYHHRVKLNSKAVICYTSGTTGKFKGVEITYRNIVGQVENLNRL
MKTDGAEVCVSILPLHHLLELSAGLLGVLWGGGHVCYLNSLIPEDLLKTMRTQNATFLIA
VPLFLSLMKKSILQKVAQQPKAKQLLFKALFHTSRYLPTIVRKRLFHQIHQQFGDKFKHF
VCGGAPLDKATLQFFTNLGFTIYQGYGMTETSPVISANTPYKNRYGSVGKPLPGCEVKID
KKNQLDTYAVGEILTRGHHVMAGYFDDQTLTAQTIDPQGWLHTGDLGYIDKKGFLYVTGR
KKNTIVLADGQNLQPEQIEPQLFAHPDIKEGCVVALTANKGINKGRLQVCAVVVASDELI
AELNQNKHALEHRLTDIIEQKSETLARWKRPNIVIVLSQDLPRSTTRKIKRIQVEQIVQQ
HAQQKEVE
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
ttgactaaaaaatttgatctctatcgaactttcaaaatgagcattggcttattggaaaaa
ggtgaaatcatgaaaacagcattattggtagacaggctagagcagtactcgcaagcagaa
tttaaagttgatgttgctgctactttgcaagctaaggcaaatgaatattccacacaagta
gctttatcgggccatttgctaggtggtgagataaatgttgaagatcaattcacctatgcc
gagctgtctgaggaagtaaagcagttttctaaattacttttagcaaaaggggttcgcaga
tcagatcgaattgcattattaagtgaagcgcgtccacattgggctatcgcatttttagcc
attctttcttgcggtgctattgtggtaccagttgacccacaattaacagaagtggaatta
ctgttaattttaaacgatgcaaaacctaaggcgctaattgcgtctactcacatgtttaca
acaggggtaacgctgcaaaagcaactcaataccattaactttgttattgaacttgagtgt
tataaagcgcatttaaccacacttgaatcatcggtcacatcgtttagtaaatatcaccat
cgagttaaattaaacagtaaagcagtgatttgctacacctcgggcacgacaggaaagttt
aaaggtgtcgaaattacctatcgaaatattgtcggtcaggtcgaaaatttaaatcgacta
atgaaaaccgatggcgcagaagtatgtgtatcgatattacccttacatcatttattagaa
ttatcagcaggcttattaggtgtactgtggggtggtgggcatgtgtgttatctaaatagc
ttaattcctgaagatcttttaaaaaccatgcgtactcaaaatgcaactttcttaattgca
gtaccgctgtttttatcattaatgaaaaaatctattttacaaaaggttgcgcaacagcca
aaagcgaaacagttattgtttaaggcgctttttcatacaagccgatatttaccaaccatt
gtaagaaaacgattgtttcatcaaattcatcagcaatttggcgataagtttaaacatttt
gtttgcggcggggcgccactggataaagccacattgcagttttttaccaaccttggtttt
accatatatcaaggctacggtatgacagaaacgagcccggtgatcagtgccaatactccc
tataaaaatcgttatggttcagtaggtaaaccactacctggctgtgaagtaaaaatagac
aaaaagaatcaattagatacttatgctgttggtgaaattcttactcgcggtcatcatgtg
atggcaggttattttgatgatcaaacattaacggcgcaaacaattgatccccagggctgg
ttacacactggtgacttgggttatatcgacaaaaaaggttttctttatgtaaccggtcga
aagaaaaataccattgttttagccgacggccaaaatttacaacctgaacagatagagcca
cagttatttgctcatcctgatattaaagagggttgtgtggtcgctttaacggccaataaa
ggaatcaataaaggccggttacaagtgtgtgctgttgttgtggcaagtgatgaattaatt
gcagagctaaatcaaaacaaacatgcacttgagcacagactcacagacattattgaacaa
aaaagtgagacgcttgcacgttggaagcgacctaatatcgttattgtactttcgcaagat
ttacctcgttcaactacaagaaaaattaaacgcatacaggttgaacaaattgtgcaacaa
cacgctcaacagaaggaggtcgaataa
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