Thalassotalea nanhaiensis: RI845_14760
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Entry
RI845_14760 CDS
T10168
Symbol
srmB
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
tnn Thalassotalea nanhaiensis
Brite
KEGG Orthology (KO) [BR:
tnn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tnn03009
]
RI845_14760 (srmB)
Enzymes [BR:
tnn01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
RI845_14760 (srmB)
Ribosome biogenesis [BR:
tnn03009
]
Prokaryotic type
rRNA helicases
RI845_14760 (srmB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
WNC67775
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All DBs
Position
3419568..3420842
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AA seq
424 aa
AA seq
DB search
MFKQFDLDDELVAGTVKAGFKKPTSIQNLVLPEAMAGKDVLASAPTGTGKTAAFILPCAQ
HLLDYPRTKPGFPRVLILAPTRELATQIFQQAELLTEFTDIKIGLITGGVNYGSHKEILT
QTTDMLIATPGRLMDYIDNEQFDARDIEILVLDEADRMLDMGFSDSINRIAGEARWRKQT
LLLSATLAGAGIIRFSKDLLNEPVFVESDPSRKEKAKTHQWLHLADSKEHKLKLLCHILK
QKDVKRAVVFANKRETVQMLAGVLQGEDLSNAWLEGEMPQDKRNNAVSRVKDGKVNILIA
TDVAARGLDIDDITHVINFDMPRKADIYVHRIGRTGRAGKKGTAISLVEAHDMLSVGKIE
RFTEEILRRRVIDELRPAYKEARIPVKKNKTKKVVKKNAGLTRKAKAAKKAKKAKKAKKK
SAAK
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgtttaaacagtttgatcttgatgatgaacttgttgccggcaccgtaaaagctggtttt
aaaaaaccaacatctatccaaaatttagtcttgccagaagcaatggcaggtaaagatgta
ttagcatctgcacctactggtacaggaaaaacagccgcgtttattttaccttgtgctcaa
cacttattagattacccaagaaccaaaccgggctttccaagagtattaattcttgcgcct
acgcgcgaattagctacgcagatttttcaacaagctgagttattaaccgagttcaccgac
atcaaaattggattaattaccggtggtgtaaattacggttcgcacaaagaaatccttaca
caaacaaccgatatgcttatcgccacccctggtcgtttaatggattatattgataacgaa
caattcgatgccagagatattgaaatattggtattggacgaagctgatcgcatgttggat
atgggtttttctgacagcattaaccgaattgccggtgaagctcgctggcgcaagcaaaca
ttattactgtcagctacgttagctggagctggtattattcgtttttctaaagacttatta
aacgaacctgtatttgtagagtcagatccttctcggaaagaaaaagctaaaactcatcag
tggttgcatttagctgatagtaaagagcataaattaaaactgctgtgtcatattcttaaa
caaaaagatgtgaaacgcgcagtagtttttgccaataaacgtgaaaccgtacaaatgctt
gccggtgttttacaaggtgaagacttaagcaatgcctggcttgaaggtgaaatgccacaa
gacaagcgcaataatgctgtatcacgagtaaaagatggcaaggtaaatattttaattgct
accgatgtcgccgcgcgtgggctagatattgatgacattacgcatgttattaactttgat
atgccacgtaaggcagatatttatgtacaccgtataggccgaactggtcgtgctggtaaa
aaaggtaccgctatttcactggttgaagcacatgacatgctatccgttggaaaaattgaa
cgctttactgaagagattttacgccgccgtgttattgatgaacttcgcccagcctataaa
gaagctcgcattccagtcaaaaaaaataagactaaaaaagtagttaagaaaaatgccggg
ttaacacgaaaagcgaaagccgctaaaaaagccaaaaaagcgaaaaaggcaaagaaaaag
tcagccgctaaataa
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