Thermotoga petrophila RKU-10: Tnap_0243
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Entry
Tnap_0243 CDS
T01139
Name
(GenBank) DNA polymerase III, alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
tnp
Thermotoga petrophila RKU-10
Pathway
tnp03030
DNA replication
tnp03430
Mismatch repair
tnp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tnp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Tnap_0243
03430 Mismatch repair
Tnap_0243
03440 Homologous recombination
Tnap_0243
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tnp03032
]
Tnap_0243
03400 DNA repair and recombination proteins [BR:
tnp03400
]
Tnap_0243
Enzymes [BR:
tnp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Tnap_0243
DNA replication proteins [BR:
tnp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Tnap_0243
DNA repair and recombination proteins [BR:
tnp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Tnap_0243
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
Motif
Other DBs
NCBI-ProteinID:
ADA66348
UniProt:
D2C5W2
LinkDB
All DBs
Position
complement(243502..246030)
Genome browser
AA seq
842 aa
AA seq
DB search
MIPWVISPYSFDGSVVRFEKLVLLLKKKGLKSVILADRNFHAAVKFNTIMRKHGLIPVHG
LWKDGRIFVARNREEFDSLVSYYNGEIDKLENVPIFHESELTPVRYLDNSERKASIFMRK
VFGLDEDVQGFPEKCEDAVDTLNAEAYDLRVNHRFPTPPEDWDESLIEKAESLGEEYVSR
LKRELEVIKRKGFTPYIYTVGKVVDIARKLGIKVGPGRGSAVGSLVAHLCGITEIDPIKY
DLLFERFLNEERQEPPDIDVDVEDRRRKDLIKELSKSFQVYQVSTFGNLTEKSLKNLINS
VLPDASLEEKNEIYKIVYGLPHHPSVHAAGIVISENPLPLPTREEEDIPITDYDMYDLQE
IGVVKIDILGLKTLSFIKDFKKEIFDYSDEKTYHLISKGKTLGVFQLEGLQARKLCRRIS
PRNMDELSILLALNRPGPLRSGLDVMFSNPKNVPEFFRKTFPETRGVLIYQEQIMRLAMF
AGLSGTEADILRRAIAKKEREKMEPLLEKMKKGLLEKGMENAEQILEILLNFSSYAFNKS
HSVAYAHITYQTAYLKVHHLEEFFKLYFAYNSSDTEKIFLAVQELRSEGYRVHPPDINTS
GKELVFHGKDVYLPLTVVKGVGATLVEQIEKIRPINSVRELQERVTGVPRNVVESLITAG
VFDKLYENRKLALEELNKKVEKDILEIRSLFGEKVEQESSNIKIGDITELEEKSMGFPLT
PVPEVPTGLFAGIADVFTYGRTLPVLVKRVSRNIVTDGLSICRVRADVPDGVHLVLLSPL
QKIIKIWPFNENTRFVYRVDFTATLEKAGQNEITEVLKNGAVVRYEGYRPLTDEYRYRVV
PR
NT seq
2529 nt
NT seq
+upstream
nt +downstream
nt
atgattccgtgggtgatatctccctattccttcgacggctcggtcgttcgattcgaaaaa
ctggttctcctcttgaaaaagaaagggctgaagtctgttatccttgccgacagaaacttc
cacgccgctgtgaagttcaacacgatcatgagaaaacacggcttgataccggttcacggc
ctctggaaagacggcagaatcttcgtcgcgagaaacagagaggaattcgacagtctggtc
agttactacaacggagaaatagataaactcgaaaacgtacccattttccacgaaagcgaa
ctaacacccgtaagatacctcgataactctgaaaggaaggcaagcatcttcatgagaaaa
gtcttcgggctcgacgaagacgttcagggttttccggaaaaatgtgaagatgcagtcgac
actttaaacgcagaagcctacgatctcagagtgaatcacagatttcccactcctccagag
gattgggacgaatcactcatagaaaaggcagagtcgctgggtgaagagtacgttagtcgt
ttgaaaagagaactcgaggtgataaaaagaaagggtttcactccgtacatctacacggta
ggcaaagtggtagatatcgcaagaaaactgggtataaaagtcggtcctggaagaggaagt
gcggtaggttccctcgttgcacacctgtgtggaataaccgagatagatcccataaaatac
gatcttctcttcgaacgcttcctaaacgaagaaaggcaggaaccacccgatatagatgtg
gatgtggaagacagaagaagaaaggacctgataaaggagctatcaaagtcttttcaagtc
tatcaggtttcaaccttcggaaacctcacagagaaatctctgaaaaacctcataaactcc
gttcttccagatgcgtctcttgaagaaaaaaacgaaatctacaaaatcgtttatggactg
ccgcaccatcccagtgttcacgccgcgggaatcgtgatctcagaaaatcctctgccatta
cccacaagagaggaagaagatatcccaataacggactacgacatgtacgatcttcaagaa
ataggtgttgtgaagatcgatatactgggtcttaaaacactctcgttcataaaggatttc
aaaaaagagattttcgattactctgatgaaaaaacgtatcatctcatctccaagggaaaa
actctcggtgtgtttcagctcgaaggtctccaggcaagaaaactatgcagaagaatctct
cccagaaacatggacgaactctccattctccttgccctcaacagacctggtccattgagg
tctggcctggatgttatgttttcgaatccgaagaacgttcccgagtttttcaggaagacg
tttccagagacaagaggggttctgatctatcaggaacagatcatgcgactcgccatgttc
gcgggtctctcaggcaccgaagcggatattttgagaagggccattgcaaagaaagaaaga
gaaaaaatggaacctctccttgaaaagatgaaaaaaggccttcttgaaaaaggtatggag
aacgcagaacagatcctcgagatcctcctgaacttttcctcctatgccttcaacaagtct
cacagcgtcgcatacgcccacatcacataccagacggcatatttgaaagtccatcatctt
gaagaattcttcaagctctacttcgcgtacaattcttcagacaccgaaaagatcttcctt
gccgttcaggaactgagaagcgaaggatacagagtacatcctccagatatcaacacctct
ggaaaagaactggtctttcacggtaaagacgtttaccttcccctgacggttgtgaaagga
gtgggagcaaccctggttgaacaaatcgaaaaaatcaggccgatcaacagtgtgagagaa
cttcaggaaagggtaaccggagttccgagaaacgttgtggaaagcctgatcacagcaggc
gtcttcgacaaactttatgaaaacagaaaactggcactggaagaactgaacaaaaaggtt
gagaaagatattcttgagattcgaagcctcttcggagaaaaggtagagcaggaaagttca
aacatcaaaataggagacatcaccgaactcgaagagaagagcatgggatttccgttgaca
cccgttcctgaagttcctacaggactctttgccggtatagccgatgtcttcacgtatggt
aggactcttcctgtgctcgtcaaaagagtttcgagaaacatcgtgacggatggcctttct
atttgccgggtaagggcagacgttcccgatggtgttcaccttgtgctcctctcacccctt
cagaagatcatcaaaatctggcccttcaatgaaaacaccaggttcgtgtacagagtggat
tttaccgcgacactggaaaaggccggtcaaaacgagataacggaagtccttaaaaacggg
gctgtcgtaaggtatgaaggatacagacctctaacggatgaatatcgctacagagtcgtt
cctcggtga
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