Thermotoga petrophila RKU-10: Tnap_1118
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Entry
Tnap_1118 CDS
T01139
Name
(GenBank) DNA-directed RNA polymerase, omega subunit
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
tnp
Thermotoga petrophila RKU-10
Pathway
tnp03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
tnp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Tnap_1118
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tnp03021
]
Tnap_1118
03400 DNA repair and recombination proteins [BR:
tnp03400
]
Tnap_1118
Enzymes [BR:
tnp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Tnap_1118
Transcription machinery [BR:
tnp03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Tnap_1118
DNA repair and recombination proteins [BR:
tnp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Tnap_1118
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
Motif
Other DBs
NCBI-ProteinID:
ADA67205
UniProt:
D2C8B9
LinkDB
All DBs
Position
1153763..1154002
Genome browser
AA seq
79 aa
AA seq
DB search
MEKMVKFNLRYDELLKKIPYKYAIPVVVAKRAEAIREYARPFVITDDENPVSIAFMELSL
NYIRIKNEEILKALIPKVK
NT seq
240 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagatggtgaagttcaatctcaggtacgatgaactgcttaagaagataccctac
aagtacgccatacctgttgttgtggcaaagcgtgctgaagcgatcagagaatacgccagg
ccgtttgtgattacagatgatgagaatcctgtaagtatcgccttcatggagctcagcctg
aactacatcaggatcaaaaacgaggagatactgaaagcgctcattccgaaggtgaagtga
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