Thermotoga petrophila RKU-10: Tnap_1187
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Entry
Tnap_1187 CDS
T01139
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
tnp
Thermotoga petrophila RKU-10
Pathway
tnp03030
DNA replication
tnp03410
Base excision repair
tnp03420
Nucleotide excision repair
tnp03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
tnp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Tnap_1187
03410 Base excision repair
Tnap_1187
03420 Nucleotide excision repair
Tnap_1187
03440 Homologous recombination
Tnap_1187
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tnp03032
]
Tnap_1187
03400 DNA repair and recombination proteins [BR:
tnp03400
]
Tnap_1187
Enzymes [BR:
tnp01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Tnap_1187
DNA replication proteins [BR:
tnp03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Tnap_1187
DNA repair and recombination proteins [BR:
tnp03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Tnap_1187
NER (nucleotide excision repair)
GGR (global genome repair) factors
Tnap_1187
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_5
Ribosomal_L12
RNase_T
Motif
Other DBs
NCBI-ProteinID:
ADA67273
UniProt:
D2C3G9
LinkDB
All DBs
Position
1216419..1219100
Genome browser
AA seq
893 aa
AA seq
DB search
MARLFLFDGTALAYRAYYALDRSLSTSAGIPTNATYGVARMLVRFIKDHIIVGKDYTAVA
FDKRAATFRHKLLETYKAQRPKTPDLLIQQLPYIKRLVEALGMKVLEIEGYEADDIIATL
AVKGLSLFDEIFIVTGDKDMLQLVNEKIKVWRIVKGISDLELYDAQKVKEKYGVEPHQIP
DLLALTGDEIDNIPGVTGIGEKTAVQLLEKYKDLEDILNHVRELPQKLRKALLRDRESAV
LSKKLAILETNVPIEINWEELRYQGHDREKLLSLLKELEFASIMKELQLYEESEPVGYRI
VKDPVEFEKLVEKLKETPSFAIDLETSSLDPFDCDIAGISVSFKPKEAYYIPLHHRNAQN
LDEKEVLKKLKEILEDPGAKIVGQNLKFDYKVLMVKGVEPVPPHFDTMIAAYLIEPNEKK
FNLDDLALKFLGYKMTSYQELMSFSSPLFGFSFVDVPLEKAANYSCEDADITYRLYKTLS
LKLHEADLENVFYKIEMPLVSVLARMELNGVYVDTEFLKKLSEEYGKKLEELAEEIYRIA
GEPFNINSPKQVSRILFEKLGIKPRGKTTKTGDYSTRIEVLEELAGEHEIIPLILEYRKI
QKLKSTYIDALPKMVNPKTGRIHASFNQTGTATGRLSSSDPNLQNLPTKSEEGKEIRKAI
VPQDPNWWIVSADYSQIELRILAHLSGDENLLRAFEEGIDVHTLTASRIFNVKPEEVTEE
MRRAGKMVNFSIIYGVTPYGLSVRLGVPVKEAEKMIVNYFVLYPKVRDYIQRVVSEAKEK
GYVRTLFGRKRDIPQLMARDRNTQAEGERIAINTPIQGTAADIIKLAMIEIDRELKERKM
RSKMIIQVHDELVFEVPDEEKDALVELVKDRMMNVVKLSVPLEVDVTIGKTWS
NT seq
2682 nt
NT seq
+upstream
nt +downstream
nt
atggcgaggctatttctctttgatggaaccgctctggcttacagagcgtattatgcgctc
gatagatcgctttccacctccgccggcattcccacaaacgccacatacggtgtggcgagg
atgctggtgagattcatcaaagaccatatcatcgtcgggaaagactatactgctgtggct
ttcgacaaaagagctgctaccttcaggcacaagctcctcgagacttacaaggctcaaaga
ccaaagactccggatctcctgatccagcaacttccgtacataaaaagacttgttgaagca
cttggaatgaaggtgctggagatagagggatacgaagcagacgatataattgccactctg
gctgtgaaagggctttcgctcttcgacgagatattcatagtgactggtgacaaagatatg
cttcagcttgtgaacgaaaagatcaaggtgtggcgaatcgtaaaagggatctccgacctg
gaactttacgatgcacagaaggtgaaggaaaaatacggtgttgaaccccatcagattccg
gatcttctggctctaaccggagacgaaatagacaacatccccggtgtaactgggataggt
gaaaagactgctgttcagcttctagagaagtacaaagacctcgaagacatactgaatcat
gttcgcgaacttcctcaaaagttgagaaaagccctgcttcgagacagagaaagcgccgtt
ctcagcaaaaagctggcgattctggaaacaaacgttcccatcgaaataaactgggaagaa
cttcgctaccagggccacgacagagagaaactcctgtcactcttgaaagaactggaattc
gcatccatcatgaaggaactccaactgtacgaagagtccgaacctgttggatacagaata
gtgaaagatccggtggaatttgaaaaactcgtagagaagctgaaagaaaccccttcgttt
gccatagatcttgaaacgtcttccctcgatcccttcgactgtgacattgctggtatttct
gtgtcattcaaaccgaaggaagcgtactacataccgcttcatcacagaaacgcccagaac
ctggatgaaaaagaggtcttgaaaaagctaaaagaaatactggaagatcctggagcaaag
atcgttggtcaaaatctgaaattcgattacaaagttttgatggtgaagggtgttgaacct
gtccctccacactttgacacgatgatagcggcttaccttattgaaccgaacgaaaaaaaa
ttcaatctggacgatctcgcacttaaatttctcggttacaaaatgacttcctaccaggaa
ctcatgtctttctcctcaccgctgtttggtttcagttttgtcgatgttcctctggaaaaa
gcagcgaactattcctgtgaagatgcagacatcacctacaggctctacaagaccctgagc
ttaaaactccacgaggcagatctggagaacgtgttctacaagatagaaatgcctcttgta
agcgtgcttgcacggatggaactgaacggtgtgtatgtggacacagagtttctgaagaaa
ctctcagaagagtacggaaagaaactcgaggaactggcagaggaaatatacaggatagcc
ggagaaccgttcaacataaactcaccaaagcaggtttcaaggatcctctttgaaaaactc
ggtataaaaccacgtggtaaaacgacgaaaacgggagactactcaacacgcatagaagtc
ctcgaggaacttgccggtgaacacgaaatcattcctctgattctcgaatacagaaagata
cagaaattgaaatcaacctacatagacgccctcccaaagatggtcaacccaaaaaccgga
aggattcatgcttctttcaatcaaacggggactgccaccggaagactcagcagcagtgat
cccaaccttcagaatctcccaacgaagagtgaagaaggcaaagaaatcaggaaagcgatt
gttcctcaggatccaaactggtggatcgtcagcgccgactactcccagatagaactgagg
atactcgcccatctcagcggtgatgagaatcttttgagggcgttcgaagaaggcatcgac
gtccacactctaacggcttccagaatattcaacgtgaagcccgaagaggtaactgaagag
atgcgccgcgctggtaagatggtgaacttctctatcatatacggtgtaacaccttatggt
ctgtctgtgaggcttggagtacctgtgaaagaggcagaaaagatgattgtcaactacttc
gtcctctacccaaaggtgcgcgattacattcagagggtcgtatcggaagcgaaagaaaaa
ggctatgttagaacgctgtttggaagaaaaagagacataccacagctcatggccagggac
agaaacacacaagctgaaggagaacgaattgccataaacactcccatacagggtacagca
gcggatataataaagctggctatgatagaaatagacagggagctgaaagaaagaaaaatg
agatcgaagatgatcatacaggtccacgacgaactggtttttgaagtgcccgatgaggaa
aaagacgcactcgtcgaactggtgaaggacagaatgatgaacgtggtgaaactttcagtg
ccgcttgaagtagatgtaaccatcggcaaaacatggtcgtga
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