Thermotoga petrophila RKU-10: Tnap_1234
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Entry
Tnap_1234 CDS
T01139
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
tnp
Thermotoga petrophila RKU-10
Brite
KEGG Orthology (KO) [BR:
tnp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tnp03016
]
Tnap_1234
Enzymes [BR:
tnp01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
Tnap_1234
Transfer RNA biogenesis [BR:
tnp03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Tnap_1234
Prokaryotic type
Tnap_1234
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF2344
DUF8115
Motif
Other DBs
NCBI-ProteinID:
ADA67319
UniProt:
D2C3L5
LinkDB
All DBs
Position
complement(1262287..1263024)
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AA seq
245 aa
AA seq
DB search
MKRVAAVIEYDGSNFFGYQGQPDVRTVQGVIEDALERIFKQRIYTQAAGRTDAGVHANGQ
LIAFNCPNDRMTTEDIKNAMNANLPDDVYVKEVFEVPVNFHPRFDVTKRIYHYFILTSRQ
KNVFLRKYVWWFPYELDLDAMRKAAKYLEGTHDFTSFKTGSDERDPVRTIYRIRILRLKN
DLVLIRVEGRSFLRRMVRNIVAALVKVGLKQWEPEKMKEVLEARDRSAAAGTAPAHGLYF
YKVLF
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgaagcgcgtggcggcagtgatcgagtacgatggaagtaatttctttggataccagggg
caacccgatgtcagaacggttcagggagttatagaagacgctcttgagaggatattcaaa
cagagaatctacacccaggcagcgggaagaacggacgctggtgttcatgcgaacggtcag
ctcatcgctttcaactgtccgaacgatcgaatgaccactgaggacataaaaaacgccatg
aacgcgaatcttccggatgatgtttatgtgaaagaggttttcgaagttcctgtgaatttt
catccccgtttcgatgtgacaaagagaatctatcactacttcattctgacttcgaggcag
aagaacgttttcctcagaaaatacgtctggtggtttccctacgagctcgatctcgatgcg
atgcgaaaagcggcgaagtatctggaaggtacccacgacttcacctctttcaagacgggg
agtgatgaaagagatcctgtgcggaccatatacagaatcagaattttgaggttaaaaaac
gatcttgttctcataagggtggagggaaggtcctttctgagaagaatggttcgaaacatc
gttgccgctcttgtgaaagttggtttgaagcagtgggaacctgagaagatgaaggaggtg
ctcgaagcacgcgacaggagcgcggcggctggtaccgcacctgcacatggcttgtacttt
tacaaagtgctgttttga
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