Thermodesulfobium narugense: Thena_0005
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Entry
Thena_0005 CDS
T01488
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing)
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
tnr
Thermodesulfobium narugense
Brite
KEGG Orthology (KO) [BR:
tnr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tnr03032
]
Thena_0005
03400 DNA repair and recombination proteins [BR:
tnr03400
]
Thena_0005
Enzymes [BR:
tnr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Thena_0005
DNA replication proteins [BR:
tnr03032
]
Prokaryotic type
DNA Topoisomerases
Thena_0005
DNA repair and recombination proteins [BR:
tnr03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Thena_0005
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AEE13658
UniProt:
M1E5A4
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All DBs
Position
4157..6055
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AA seq
632 aa
AA seq
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MKYTSKDIVVLEGMEAVRKRPGMYIGSIGIKGLLHLVYEVVDNSVDEFMAGYCKKISVTI
HKSNYVTIEDDGRGIPTDIHEQTNKNALELVLTTLHAGGKFNDKVYKVSGGLHGVGVSVV
NALSERFIATVYRDGKIFTQEFSRGNPVSEIKIIGESDKHGTKIKFLPDKEIFKDITWDT
DELKARFQEIAFLNPGLEIVFSDERIGEKETFYDEKGILGFVEYLNKNSKPLYSPPIVIQ
GEYEEVYVDIALQHVDSTYENIICFANNIATKEGGSHLTAFKNSLTKLTNQYAKDKKILK
EDENFQGEDIRSGLTAVISVKLKEPLFEGQTKTKLSSLEAKNAVEKLMEKFIIELESKPE
VANMIIKSSLAAKEAREAAKKARDMVRKKHDFTSSISLPGKLALCSSKKPEECELFIVEG
DSAGGSAKQGRDRRFQAILPLRGKILNVEKANIDKILANQEIKALAASIGLSFYEEDKPV
SDWIKNLRFHKIIIMTDADVDGSHIRTLLLTLFFRYFRPLIETGKVFIAQPPLYMIRKGK
ERRYAMNDEELNDILSEIKSPDSIQRFKGLGEMTPSQLWDVAMNPEKRTILKVCIEDASE
ANRIFEILMGDNVEYRKAFIERYAREVKNLDV
NT seq
1899 nt
NT seq
+upstream
nt +downstream
nt
atgaaatatacttcaaaggatatcgtagttctggagggaatggaagcagtaagaaaaaga
ccaggaatgtatattggttcaattgggatcaaaggtctattacacttagtatatgaagta
gtagataactctgtagacgaatttatggcaggatattgcaaaaaaatatctgtaacaatc
cataaatcaaattatgtaactatagaagatgacggtagaggaataccaacagacatacac
gaacaaacaaacaaaaacgctcttgaactagtactaactacacttcatgctggtggaaaa
ttcaatgataaggtctataaagtatctggtggattacacggagttggagtatcagtggta
aatgctctatcagaaaggttcattgcaactgtatatagagacggaaaaatttttacacag
gaattctcccgaggtaatcctgtatcagaaattaaaataataggtgaaagtgataaacac
ggaacaaaaataaaattcttaccagataaggaaatttttaaagacataacctgggataca
gacgaactaaaggcaagatttcaagaaattgcatttttaaatccaggtctagaaatagta
ttttctgacgaaagaattggtgaaaaagaaaccttttatgatgaaaaaggtatattgggt
ttcgttgaatatttaaacaaaaattcaaaacctttatattccccacctatagttatccag
ggcgaatatgaagaggtttacgtcgatatagcactccaacacgttgattcaacctatgaa
aatataatttgttttgcaaataacattgctactaaagaaggaggatcgcatttaactgca
ttcaaaaattctctaacaaaattaactaatcaatatgcaaaggataaaaagattctcaaa
gaagatgaaaactttcaaggagaggatattagaagcggactaacagcagtaatttcagta
aaattaaaagaaccattatttgaaggtcaaacaaaaaccaaactttcttctttagaggct
aaaaatgcagtagagaagcttatggaaaaattcataatagaattagaatcaaaaccggaa
gtagccaatatgataataaaatcatctctagctgcaaaggaagctagagaagctgcaaaa
aaagctagagatatggtaagaaaaaaacacgactttacctcaagtatttccttgcctgga
aaattggcgttgtgttcttcaaaaaaaccagaagaatgtgaactgtttattgtggaaggt
gacagtgcaggcgggtctgcaaaacagggaagggatagaagatttcaagctatccttcca
ctaagaggcaaaatattaaatgttgaaaaagctaatatagataagattttagcaaaccaa
gaaataaaggcccttgctgcttcaattggtttatccttttatgaagaagataaacctgta
tctgattggattaaaaatcttagatttcataaaattataattatgaccgatgcggacgtt
gatggttcacacattagaacgcttctcctaacgcttttttttagatatttcagaccatta
attgaaactggaaaagtatttatagctcagccacctctttatatgattagaaaaggaaaa
gagagaagatatgctatgaatgatgaagaactaaacgatatactctctgagataaaaagt
ccggattcaattcaaagattcaaaggattgggtgaaatgaccccatcacaactgtgggac
gttgcaatgaatcctgaaaagagaacgatcttaaaggtatgtatagaagacgcaagcgaa
gctaatagaatttttgagattcttatgggagataacgtagagtacaggaaagcgttcatt
gaaagatatgctcgggaggtaaaaaacttagatgtctga
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