Thermodesulfobium narugense: Thena_0062
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Entry
Thena_0062 CDS
T01488
Name
(GenBank) 2-dehydro-3-deoxyphosphooctonate aldolase
KO
K01627
2-dehydro-3-deoxyphosphooctonate aldolase (KDO 8-P synthase) [EC:
2.5.1.55
]
Organism
tnr
Thermodesulfobium narugense
Pathway
tnr00541
Biosynthesis of various nucleotide sugars
tnr01100
Metabolic pathways
tnr01250
Biosynthesis of nucleotide sugars
Module
tnr_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
tnr00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
Thena_0062
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
tnr01005
]
Thena_0062
Enzymes [BR:
tnr01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.55 3-deoxy-8-phosphooctulonate synthase
Thena_0062
Lipopolysaccharide biosynthesis proteins [BR:
tnr01005
]
Lipid A
Thena_0062
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Gene cluster
GFIT
Motif
Pfam:
DAHP_synth_1
Phage_endo_I
Amdase
Motif
Other DBs
NCBI-ProteinID:
AEE13714
UniProt:
M1E6S2
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Position
59541..60359
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AA seq
272 aa
AA seq
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MFKINDVEIGGKDLFFILGPCVIESEEHVIKMANIIKEISKSLNIQVIFKSSYDKANRTS
LSSYRGPGIKEGLRILERVKKEVGLPITTDVHSVEEVTLASKVIDLIQLPAFLCRQTDLL
VSAGKAKRPVNIKKGQFVAPHSIGPMIEKVKSTGEERVCITERGYTFGYNNLVVDMRSIQ
IMKSFNIPVIFDATHSVQLPGGLGDSSGGEKQFVPTLARSAVAAGADGVFMECHDCPECA
LCDGPNSMPVNEVEDLLKSLIAIKSAINSYIR
NT seq
819 nt
NT seq
+upstream
nt +downstream
nt
gtgttcaagataaatgacgtggaaattggaggtaaagatttattttttatattgggtccg
tgtgttattgaaagcgaagaacacgtaataaaaatggcaaacattattaaagaaatttca
aaatcacttaatatacaggtaatatttaagagctcttatgataaggcaaatagaacatct
ttatcttcttatagaggtcctggaattaaagagggattaagaattctagagagagtaaaa
aaagaagtaggtttgccgataactaccgacgtgcacagcgtagaagaagtgactcttgcc
tcaaaagttatcgatttaattcaattgcctgcttttttatgcaggcaaacagatcttctc
gtatctgctggcaaggcaaaaaggcctgtaaatattaaaaaggggcaatttgttgcgcct
cactctattggtcccatgattgaaaaggtaaaatctactggtgaagaaagagtttgtatc
acagaaagaggatacacctttggatataataatctagttgtagatatgaggtcaattcaa
ataatgaagtcatttaatataccagttatatttgatgcaactcatagcgttcaattgcct
ggcggtttaggggattcttctggaggagaaaaacaatttgttcctactcttgctcggtct
gctgtagctgctggtgctgatggtgtgtttatggaatgtcatgactgccctgaatgtgct
ctttgtgacgggccaaattcaatgccagttaatgaggttgaagacttattgaagagtctt
attgctattaaaagtgctataaattcttatataagatag
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